Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400061428 | Potato | nucleus | 88.35 | 89.22 |
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 48.54 | 64.1 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 57.28 | 62.77 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 47.57 | 62.03 |
| Bra005731.1-P | Field mustard | cytosol | 54.37 | 61.54 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 54.37 | 61.54 |
| CDY11219 | Canola | cytosol | 54.37 | 61.54 |
| AT5G02580.1 | Thale cress | cytosol | 54.37 | 61.54 |
| CDY72004 | Canola | extracellular | 33.98 | 61.4 |
| KRH19744 | Soybean | cytosol | 56.31 | 60.42 |
| Solyc10g084600.1.1 | Tomato | nucleus | 63.11 | 59.63 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 45.63 | 59.49 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 55.34 | 59.38 |
| Zm00001d047779_P001 | Maize | nucleus | 46.6 | 59.26 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 44.66 | 57.5 |
| Os05t0462000-00 | Rice | cytosol | 56.31 | 56.86 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 53.4 | 56.7 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 54.37 | 56.57 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 53.4 | 55.0 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 51.46 | 54.64 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 45.63 | 54.02 |
| Solyc05g054750.2.1 | Tomato | cytosol | 46.6 | 53.33 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 50.49 | 53.06 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 50.49 | 53.06 |
| EES19655 | Sorghum | cytosol | 52.43 | 52.94 |
| GSMUA_Achr10P... | Banana | cytosol | 47.57 | 52.69 |
| GSMUA_Achr7P15290_001 | Banana | cytosol | 39.81 | 52.56 |
| TraesCS1A01G287200.1 | Wheat | cytosol | 50.49 | 52.53 |
| TraesCS3D01G349400.1 | Wheat | cytosol, nucleus, plastid | 45.63 | 49.47 |
| TraesCS3A01G355400.1 | Wheat | cytosol, nucleus, plastid | 45.63 | 49.47 |
| TraesCS3B01G388300.1 | Wheat | cytosol, nucleus, plastid | 45.63 | 48.96 |
| Os01t0837600-01 | Rice | cytosol, nucleus, plastid | 46.6 | 47.06 |
| HORVU3Hr1G087010.1 | Barley | cytosol, nucleus, plastid | 44.66 | 46.0 |
| Zm00001d012431_P001 | Maize | cytosol, nucleus, plastid | 43.69 | 43.69 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 49.51 | 41.13 |
| TraesCS4B01G202900.2 | Wheat | cytosol | 35.92 | 38.14 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 48.54 | 34.97 |
| TraesCS4D01G203800.1 | Wheat | mitochondrion | 50.49 | 33.12 |
| Solyc05g005230.2.1 | Tomato | cytosol | 30.1 | 30.1 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 45.63 | 27.49 |
| Zm00001d042940_P001 | Maize | nucleus | 44.66 | 24.08 |
| Solyc01g005640.2.1 | Tomato | nucleus | 33.98 | 11.63 |
| Solyc10g079590.1.1 | Tomato | nucleus | 34.95 | 11.32 |
| Solyc10g079710.1.1 | Tomato | nucleus | 28.16 | 10.21 |
| Solyc01g010520.2.1 | Tomato | nucleus | 31.07 | 8.94 |
| Solyc05g007270.2.1 | Tomato | cytosol | 33.01 | 8.42 |
Protein Annotations
| EnsemblPlants:Solyc09g005730.2.1 | EnsemblPlantsGene:Solyc09g005730.2 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF3 | PFAM:PF09713 |
| SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI000276B310 | UniProt:K4CQ63 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr9:+:504126..505529
Molecular Weight (calculated)
12149.4 Da
IEP (calculated)
5.997
GRAVY (calculated)
-0.852
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSSSQYIH MVQHLIEECI IFNMSQEECM DALSKHANIQ PIITSTVWKE LEKENKEFFE AYNKKTREAR RPSSIHDELE MSRQRIHCIM LDSSSNKDSK
101: EKQ
101: EKQ
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.