Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005731.1-P | Field mustard | cytosol | 98.9 | 98.9 |
| CDY11219 | Canola | cytosol | 98.9 | 98.9 |
| AT5G02580.1 | Thale cress | cytosol | 94.51 | 94.51 |
| CDY72004 | Canola | extracellular | 51.65 | 82.46 |
| Os05t0462000-00 | Rice | cytosol | 65.93 | 58.82 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 63.74 | 58.59 |
| CDY53585 | Canola | cytosol | 34.07 | 58.49 |
| CDX76114 | Canola | nucleus | 60.44 | 57.89 |
| EES19655 | Sorghum | cytosol | 64.84 | 57.84 |
| TraesCS1A01G287200.1 | Wheat | cytosol | 62.64 | 57.58 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 60.44 | 57.29 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 61.54 | 57.14 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 61.54 | 57.14 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 62.64 | 57.0 |
| CDY20432 | Canola | cytosol | 49.45 | 56.96 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 49.45 | 56.96 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 58.24 | 56.38 |
| PGSC0003DMT400061428 | Potato | nucleus | 62.64 | 55.88 |
| CDY02930 | Canola | nucleus | 58.24 | 55.79 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 48.35 | 55.7 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 48.35 | 55.0 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 58.24 | 54.64 |
| Solyc09g005730.2.1 | Tomato | nucleus | 61.54 | 54.37 |
| Zm00001d047779_P001 | Maize | nucleus | 48.35 | 54.32 |
| KRH19744 | Soybean | cytosol | 57.14 | 54.17 |
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 46.15 | 53.85 |
| CDX73396 | Canola | nucleus | 56.04 | 53.68 |
| CDY40206 | Canola | nucleus | 56.04 | 53.68 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 57.14 | 53.61 |
| GSMUA_Achr10P... | Banana | cytosol | 52.75 | 51.61 |
| TraesCS3D01G349400.1 | Wheat | cytosol, nucleus, plastid | 53.85 | 51.58 |
| TraesCS3A01G355400.1 | Wheat | cytosol, nucleus, plastid | 53.85 | 51.58 |
| GSMUA_Achr7P15290_001 | Banana | cytosol | 43.96 | 51.28 |
| TraesCS3B01G388300.1 | Wheat | cytosol, nucleus, plastid | 53.85 | 51.04 |
| Solyc10g084600.1.1 | Tomato | nucleus | 60.44 | 50.46 |
| HORVU3Hr1G087010.1 | Barley | cytosol, nucleus, plastid | 53.85 | 49.0 |
| Os01t0837600-01 | Rice | cytosol, nucleus, plastid | 50.55 | 45.1 |
| Zm00001d012431_P001 | Maize | cytosol, nucleus, plastid | 48.35 | 42.72 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 40.66 | 42.53 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 46.15 | 33.87 |
| CDX93395 | Canola | cytosol | 36.26 | 32.67 |
| TraesCS4B01G202900.2 | Wheat | cytosol | 34.07 | 31.96 |
| CDY37956 | Canola | cytosol | 35.16 | 31.68 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 47.25 | 30.07 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 51.65 | 27.49 |
| TraesCS4D01G203800.1 | Wheat | mitochondrion | 46.15 | 26.75 |
| Zm00001d042940_P001 | Maize | nucleus | 50.55 | 24.08 |
| CDY08617 | Canola | mitochondrion, nucleus | 39.56 | 10.94 |
| CDY00915 | Canola | mitochondrion, nucleus | 39.56 | 10.84 |
| CDY41330 | Canola | mitochondrion, nucleus | 38.46 | 10.7 |
| CDY56714 | Canola | mitochondrion, nucleus | 38.46 | 10.67 |
| CDY25057 | Canola | nucleus | 39.56 | 9.92 |
| CDX67857 | Canola | nucleus | 37.36 | 9.29 |
| CDY42046 | Canola | nucleus | 36.26 | 8.97 |
| CDX80017 | Canola | nucleus | 35.16 | 8.91 |
| CDX71711 | Canola | mitochondrion | 35.16 | 7.13 |
| CDY11376 | Canola | cytosol | 35.16 | 1.95 |
Protein Annotations
| EnsemblPlants:CDX80829 | EnsemblPlantsGene:GSBRNA2T00134223001 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 | PFAM:PF09713 |
| ProteinID:CDX80829 | ProteinID:CDX80829.1 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI0004EBFC86 | MapMan:35.2 |
Description
BnaC03g00830D
Coordinates
chrLK031823:+:411104..411896
Molecular Weight (calculated)
10819.0 Da
IEP (calculated)
7.058
GRAVY (calculated)
-0.673
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MGDHSSSQAS YIHLVHHLIE ECIVFNMGKK ECMDALFKHA NINPIITSTV WKELEKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTK I
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.