Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G388300.1 | Wheat | cytosol, nucleus, plastid | 91.0 | 94.79 |
| TraesCS3D01G349400.1 | Wheat | cytosol, nucleus, plastid | 89.0 | 93.68 |
| TraesCS3A01G355400.1 | Wheat | cytosol, nucleus, plastid | 89.0 | 93.68 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 47.0 | 59.49 |
| Zm00001d012431_P001 | Maize | cytosol, nucleus, plastid | 61.0 | 59.22 |
| Os01t0837600-01 | Rice | cytosol, nucleus, plastid | 58.0 | 56.86 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 56.0 | 56.0 |
| KRH67570 | Soybean | cytosol | 52.0 | 55.91 |
| KRG95854 | Soybean | cytosol | 52.0 | 55.91 |
| CDY72004 | Canola | extracellular | 31.0 | 54.39 |
| Bra005731.1-P | Field mustard | cytosol | 49.0 | 53.85 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 49.0 | 53.85 |
| CDY11219 | Canola | cytosol | 49.0 | 53.85 |
| GSMUA_Achr10P... | Banana | cytosol | 50.0 | 53.76 |
| AT5G02580.1 | Thale cress | cytosol | 48.0 | 52.75 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 47.0 | 50.0 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 48.0 | 49.48 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 47.0 | 48.96 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 28.0 | 48.28 |
| PGSC0003DMT400061428 | Potato | nucleus | 49.0 | 48.04 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 46.0 | 47.42 |
| KRH19744 | Soybean | cytosol | 45.0 | 46.88 |
| Solyc09g005730.2.1 | Tomato | nucleus | 46.0 | 44.66 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 37.0 | 42.53 |
| Solyc10g084600.1.1 | Tomato | nucleus | 44.0 | 40.37 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 63.0 | 36.84 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 43.0 | 34.68 |
| Zm00001d042940_P001 | Maize | nucleus | 65.0 | 34.03 |
| HORVU6Hr1G018770.3 | Barley | plastid | 32.0 | 7.8 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G087010.1 | EnsemblPlantsGene:HORVU3Hr1G087010 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF8 | PFAM:PF09713 |
| SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI000296C5C8 | UniProt:M0WEH7 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr3H:+:619665811..619667195
Molecular Weight (calculated)
11359.8 Da
IEP (calculated)
4.338
GRAVY (calculated)
-1.159
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MADDSSSPAS YIRLVQHLIE KCICYDMDKE ECVQALEKHA NIMPAVTSTV WKELEKENRE FFETYKKDRG GESPSHKGSP SDQASTSRNT DDNDNNDNDD
1: MADSSSASYI HMVQHMIEKC LIFHMSKEEC VEALSKHANI TPVITSTVWK ELEKENKEFF KAYEERQSKQ EQMSEEETNQ MIQKIISDSS KESDD
Arabidopsis Description
Uncharacterized protein At3g55240 [Source:UniProtKB/TrEMBL;Acc:Q9M3C7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.