Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 56.45 | 89.74 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 61.29 | 87.36 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 50.81 | 79.75 |
| Zm00001d047779_P001 | Maize | nucleus | 50.0 | 76.54 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 47.58 | 73.75 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 73.39 | 63.64 |
| TraesCS4B01G202900.2 | Wheat | cytosol | 45.16 | 57.73 |
| TraesCS4D01G203800.1 | Wheat | mitochondrion | 72.58 | 57.32 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 26.61 | 56.9 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 42.74 | 56.38 |
| GSMUA_Achr7P15290_001 | Banana | cytosol | 34.68 | 55.13 |
| KRG95854 | Soybean | cytosol | 41.13 | 54.84 |
| KRH67570 | Soybean | cytosol | 41.13 | 54.84 |
| PGSC0003DMT400061428 | Potato | nucleus | 42.74 | 51.96 |
| KRH19744 | Soybean | cytosol | 39.52 | 51.04 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 40.32 | 50.0 |
| Solyc09g005730.2.1 | Tomato | nucleus | 41.13 | 49.51 |
| CDY72004 | Canola | extracellular | 21.77 | 47.37 |
| AT5G02580.1 | Thale cress | cytosol | 33.87 | 46.15 |
| CDY11219 | Canola | cytosol | 33.87 | 46.15 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 33.87 | 46.15 |
| Bra005731.1-P | Field mustard | cytosol | 33.87 | 46.15 |
| Solyc10g084600.1.1 | Tomato | nucleus | 40.32 | 45.87 |
| HORVU3Hr1G087010.1 | Barley | cytosol, nucleus, plastid | 34.68 | 43.0 |
| HORVU6Hr1G018770.3 | Barley | plastid | 23.39 | 7.07 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G058560.1 | EnsemblPlantsGene:HORVU4Hr1G058560 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 | PFAM:PF09713 |
| SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI000B46CCB5 | UniProt:A0A287P8Q9 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr4H:-:489814554..489816756
Molecular Weight (calculated)
14277.8 Da
IEP (calculated)
5.663
GRAVY (calculated)
-0.729
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: RLITTQPHTH TAPRITITIE EEEQEEARVE RFVYLSTMAL GNDSPASYIR MVHHLIEKCM TFGMSMEECM EALSKRADVQ PVVTSTVWKE LEKENKEFFD
101: RYNKQLRSER EGRSSSGSSS NSSS
101: RYNKQLRSER EGRSSSGSSS NSSS
1: MADSSSASYI HMVQHMIEKC LIFHMSKEEC VEALSKHANI TPVITSTVWK ELEKENKEFF KAYEERQSKQ EQMSEEETNQ MIQKIISDSS KESDD
Arabidopsis Description
Uncharacterized protein At3g55240 [Source:UniProtKB/TrEMBL;Acc:Q9M3C7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.