Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11219 | Canola | cytosol | 100.0 | 100.0 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 98.9 | 98.9 |
| AT5G02580.1 | Thale cress | cytosol | 93.41 | 93.41 |
| Os05t0462000-00 | Rice | cytosol | 65.93 | 58.82 |
| Bra014767.1-P | Field mustard | nucleus | 60.44 | 57.89 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 62.64 | 57.58 |
| TraesCS1A01G287200.1 | Wheat | cytosol | 62.64 | 57.58 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 60.44 | 57.29 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 61.54 | 57.14 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 61.54 | 57.14 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 62.64 | 57.0 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 49.45 | 56.96 |
| EES19655 | Sorghum | cytosol | 63.74 | 56.86 |
| PGSC0003DMT400061428 | Potato | nucleus | 62.64 | 55.88 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 48.35 | 55.7 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 57.14 | 55.32 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 48.35 | 55.0 |
| Solyc09g005730.2.1 | Tomato | nucleus | 61.54 | 54.37 |
| Zm00001d047779_P001 | Maize | nucleus | 48.35 | 54.32 |
| KRH19744 | Soybean | cytosol | 57.14 | 54.17 |
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 46.15 | 53.85 |
| Bra007149.1-P | Field mustard | nucleus | 56.04 | 53.68 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 57.14 | 53.61 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 56.04 | 52.58 |
| GSMUA_Achr10P... | Banana | cytosol | 52.75 | 51.61 |
| TraesCS3A01G355400.1 | Wheat | cytosol, nucleus, plastid | 53.85 | 51.58 |
| TraesCS3D01G349400.1 | Wheat | cytosol, nucleus, plastid | 53.85 | 51.58 |
| GSMUA_Achr7P15290_001 | Banana | cytosol | 43.96 | 51.28 |
| TraesCS3B01G388300.1 | Wheat | cytosol, nucleus, plastid | 53.85 | 51.04 |
| Solyc10g084600.1.1 | Tomato | nucleus | 60.44 | 50.46 |
| HORVU3Hr1G087010.1 | Barley | cytosol, nucleus, plastid | 53.85 | 49.0 |
| Os01t0837600-01 | Rice | cytosol, nucleus, plastid | 50.55 | 45.1 |
| Zm00001d012431_P001 | Maize | cytosol, nucleus, plastid | 48.35 | 42.72 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 40.66 | 42.53 |
| Bra019909.1-P | Field mustard | cytosol | 36.26 | 36.67 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 46.15 | 33.87 |
| TraesCS4B01G202900.2 | Wheat | cytosol | 34.07 | 31.96 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 47.25 | 30.07 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 51.65 | 27.49 |
| TraesCS4D01G203800.1 | Wheat | mitochondrion | 46.15 | 26.75 |
| Zm00001d042940_P001 | Maize | nucleus | 50.55 | 24.08 |
| Bra029826.1-P | Field mustard | mitochondrion, nucleus | 39.56 | 10.94 |
| Bra034101.1-P | Field mustard | mitochondrion, nucleus | 38.46 | 10.77 |
| Bra003465.1-P | Field mustard | nucleus | 37.36 | 9.29 |
| Bra004538.1-P | Field mustard | nucleus | 35.16 | 8.91 |
| Bra007627.1-P | Field mustard | cytosol | 36.26 | 2.01 |
Protein Annotations
| EnsemblPlants:Bra005731.1 | EnsemblPlants:Bra005731.1-P | EnsemblPlantsGene:Bra005731 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 |
| PFAM:PF09713 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI000253FAB0 | UniProt:M4CNE3 | MapMan:35.2 |
Description
AT5G02580 (E=1e-037) | unknown protein
Coordinates
chrA03:+:334091..334623
Molecular Weight (calculated)
10818.0 Da
IEP (calculated)
8.253
GRAVY (calculated)
-0.677
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MGDHSSSQAS YIHLVHHLIE ECIVFNMGKK ECMDALFKHA NINPIITSTV WKELEKENKE FFEAYERRRK EIPTEKETAR RIRDLLSRTK I
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.