Factsheet for Bra034101.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41330	Canola	mitochondrion, nucleus	99.69	99.08
AT3G10250.5	Thale cress	mitochondrion, nucleus	88.31	88.58
Bra029826.1-P	Field mustard	mitochondrion, nucleus	88.62	87.54
AT5G04090.6	Thale cress	nucleus	66.15	66.77
VIT_08s0007g05400.t01	Wine grape	mitochondrion, nucleus	57.54	57.54
KRH66806	Soybean	nucleus	58.46	56.72
KRG95131	Soybean	nucleus	57.85	55.46
PGSC0003DMT400076756	Potato	nucleus	52.0	54.17
Solyc10g079710.1.1	Tomato	nucleus	44.62	51.06
GSMUA_Achr1P08340_001	Banana	cytosol	49.23	50.0
PGSC0003DMT400076729	Potato	nucleus	47.08	49.04
GSMUA_Achr10P...	Banana	nucleus	48.31	48.91
GSMUA_Achr11P...	Banana	nucleus	48.0	48.0
Solyc10g079590.1.1	Tomato	nucleus	46.46	47.48
Solyc01g005640.2.1	Tomato	nucleus	43.38	46.84
Os02t0137100-01	Rice	nucleus	47.38	46.81
KXG29427	Sorghum	nucleus	45.85	46.27
TraesCS6A01G104900.1	Wheat	nucleus	45.85	45.99
TraesCS6D01G093800.1	Wheat	nucleus	45.54	45.68
PGSC0003DMT400081823	Potato	nucleus	44.31	45.28
TraesCS7D01G407000.1	Wheat	nucleus	42.46	45.25
TraesCS7B01G313700.1	Wheat	nucleus	42.15	44.92
TraesCS7A01G413700.1	Wheat	nucleus	41.85	44.59
TraesCS6B01G134100.4	Wheat	extracellular	43.38	41.72
Bra014767.1-P	Field mustard	nucleus	11.69	40.0
Bra007149.1-P	Field mustard	nucleus	11.69	40.0
EER90343	Sorghum	nucleus	35.38	39.93
Bra005731.1-P	Field mustard	cytosol	10.77	38.46
Zm00001d054004_P001	Maize	nucleus	40.0	38.12
HORVU6Hr1G018770.3	Barley	plastid	45.23	35.85
Bra004538.1-P	Field mustard	nucleus	36.0	32.59
Bra003465.1-P	Field mustard	nucleus	33.85	30.05
Bra019909.1-P	Field mustard	cytosol	8.31	30.0
Bra007627.1-P	Field mustard	cytosol	34.46	6.81

Protein Annotations

EnsemblPlants:Bra034101.1	EnsemblPlants:Bra034101.1-P	EnsemblPlantsGene:Bra034101	InterPro:CHP01589_pln	ncoils:Coil	PANTHER:PTHR31871
PANTHER:PTHR31871:SF1	PFAM:PF09713	SEG:seg	TIGRFAMs:TIGR01589	UniParc:UPI00025441AA	UniProt:M4EZ58
MapMan:35.2	:	:	:	:	:

Description

AT3G10250 (E=2e-142) | unknown protein

Coordinates

chrA01:+:27446690..27448518

Molecular Weight (calculated)

36303.3 Da

IEP (calculated)

4.772

GRAVY (calculated)

-0.594

Length

325 amino acids

Sequence
(BLAST)

001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVETLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MQQMHPSGVA
101: PVQNTNGSHI QSMNQKHLGY ASEHTDQSLK SIPSSLSNAY LNGSSTLNTT NVASSVNIST HARRVDSSSP NMLSSQTTTN MPMMQGMNGG GGMIKSETAF
201: TSPASFMYGG ERNALEGHST VRDTTSISTF GNESNNNQQP LSETLLDSEA ATFGFLGQIP RNFSLSDLTA DFSQSSEILE SYDKSPFLVP DGENFLDSCD
301: RGEYQDNKRL ETISEGFSYD NIGSE

Best Arabidopsis Sequence Match ( AT3G10250.2 )
(BLAST)

001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE

Arabidopsis Description

AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.