Factsheet for Bra029826.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08617	Canola	mitochondrion, nucleus	98.48	98.48
CDY00915	Canola	mitochondrion, nucleus	95.74	94.88
Bra034101.1-P	Field mustard	mitochondrion, nucleus	87.54	88.62
AT3G10250.5	Thale cress	mitochondrion, nucleus	87.23	88.58
AT5G04090.6	Thale cress	nucleus	65.35	66.77
VIT_08s0007g05400.t01	Wine grape	mitochondrion, nucleus	57.45	58.15
KRH66806	Soybean	nucleus	58.66	57.61
KRG95131	Soybean	nucleus	57.75	56.05
PGSC0003DMT400076756	Potato	nucleus	52.58	55.45
Solyc10g079710.1.1	Tomato	nucleus	44.98	52.11
PGSC0003DMT400076729	Potato	nucleus	48.63	51.28
GSMUA_Achr1P08340_001	Banana	cytosol	48.94	50.31
Solyc10g079590.1.1	Tomato	nucleus	48.33	50.0
GSMUA_Achr10P...	Banana	nucleus	48.02	49.22
Os02t0137100-01	Rice	nucleus	48.33	48.33
KXG29427	Sorghum	nucleus	47.11	48.14
Solyc01g005640.2.1	Tomato	nucleus	43.77	47.84
TraesCS6A01G104900.1	Wheat	nucleus	47.11	47.84
GSMUA_Achr11P...	Banana	nucleus	47.11	47.69
TraesCS6D01G093800.1	Wheat	nucleus	46.81	47.53
PGSC0003DMT400081823	Potato	nucleus	44.68	46.23
TraesCS7D01G407000.1	Wheat	nucleus	42.55	45.9
TraesCS7B01G313700.1	Wheat	nucleus	42.55	45.9
TraesCS7A01G413700.1	Wheat	nucleus	42.25	45.57
TraesCS6B01G134100.4	Wheat	extracellular	44.68	43.49
EER90343	Sorghum	nucleus	35.87	40.97
Bra014767.1-P	Field mustard	nucleus	11.55	40.0
Bra007149.1-P	Field mustard	nucleus	11.55	40.0
Bra005731.1-P	Field mustard	cytosol	10.94	39.56
Zm00001d054004_P001	Maize	nucleus	40.12	38.71
HORVU6Hr1G018770.3	Barley	plastid	47.11	37.8
Bra004538.1-P	Field mustard	nucleus	34.35	31.48
Bra019909.1-P	Field mustard	cytosol	8.21	30.0
Bra003465.1-P	Field mustard	nucleus	32.22	28.96
Bra007627.1-P	Field mustard	cytosol	33.43	6.69

Protein Annotations

EnsemblPlants:Bra029826.1	EnsemblPlants:Bra029826.1-P	EnsemblPlantsGene:Bra029826	InterPro:CHP01589_pln	ncoils:Coil	PANTHER:PTHR31871
PANTHER:PTHR31871:SF1	PFAM:PF09713	SEG:seg	TIGRFAMs:TIGR01589	UniParc:UPI000254795F	UniProt:M4EM06
MapMan:35.2	:	:	:	:	:

Description

AT3G10250 (E=4e-147) | unknown protein

Coordinates

chrA05:+:22130411..22132296

Molecular Weight (calculated)

36755.8 Da

IEP (calculated)

4.856

GRAVY (calculated)

-0.644

Length

329 amino acids

Sequence
(BLAST)

001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVETLLE QAKIEPGFTE LVWQKLEEEN REFFNAYYLR LMVKHQIMEF NKLLEQQVRH MQQMHPSGLT
101: SVQNTNGSHI QSMNQKQLGY VSEHTEHQSL KPSAHHPMPS SLSNAYLNGS STLNTNVSPS VNVSTHARRV DASPNMISSQ QTTNMPPMMQ GMNGGGGGMI
201: KSETAYPASF MYGGERNNAL EGHSTVRETS IPSFSNESNN NQPIGDTLLD AEASTFGFLG SIPRNFSLSD LTADFSQSSE ILESYDKSPF LAPDAENFLD
301: SCDRGEYQGD NKRLDTISEG FSYDNLGSE

Best Arabidopsis Sequence Match ( AT3G10250.2 )
(BLAST)

001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE

Arabidopsis Description

AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.