Factsheet for TraesCS7A01G413700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G313700.1	Wheat	nucleus	91.8	91.8
TraesCS7D01G407000.1	Wheat	nucleus	90.49	90.49
EER90343	Sorghum	nucleus	66.23	70.14
TraesCS6A01G104900.1	Wheat	nucleus	65.25	61.42
GSMUA_Achr11P...	Banana	nucleus	52.79	49.54
GSMUA_Achr1P08340_001	Banana	cytosol	51.8	49.38
GSMUA_Achr10P...	Banana	nucleus	49.84	47.35
AT3G10250.5	Thale cress	mitochondrion, nucleus	47.21	44.44
PGSC0003DMT400076756	Potato	nucleus	44.59	43.59
VIT_08s0007g05400.t01	Wine grape	mitochondrion, nucleus	45.57	42.77
CDY56714	Canola	mitochondrion, nucleus	45.57	42.38
Bra029826.1-P	Field mustard	mitochondrion, nucleus	45.57	42.25
CDY41330	Canola	mitochondrion, nucleus	45.25	42.2
KRH66806	Soybean	nucleus	46.23	42.09
Solyc01g005640.2.1	Tomato	nucleus	41.31	41.86
Bra034101.1-P	Field mustard	mitochondrion, nucleus	44.59	41.85
CDY08617	Canola	mitochondrion, nucleus	44.92	41.64
Solyc10g079710.1.1	Tomato	nucleus	38.69	41.55
KRG95131	Soybean	nucleus	45.57	41.0
AT5G04090.6	Thale cress	nucleus	42.62	40.37
CDY00915	Canola	mitochondrion, nucleus	43.93	40.36
PGSC0003DMT400081823	Potato	nucleus	41.64	39.94
PGSC0003DMT400076729	Potato	nucleus	38.69	37.82
Solyc10g079590.1.1	Tomato	nucleus	39.34	37.74
TraesCS3A01G355400.1	Wheat	cytosol, nucleus, plastid	10.49	33.68
TraesCS1A01G287200.1	Wheat	cytosol	9.51	29.29
TraesCS3A01G104000.1	Wheat	unclear	32.79	27.86
TraesCS3A01G144700.2	Wheat	nucleus	33.11	27.82
TraesCS1A01G126500.1	Wheat	cytosol, nucleus, plastid	19.02	20.21
TraesCS4A01G101700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	8.85	18.88

Protein Annotations

EnsemblPlants:TraesCS7A01G413700.1	EnsemblPlantsGene:TraesCS7A01G413700	InterPro:CHP01589_pln	PANTHER:PTHR31871	PANTHER:PTHR31871:SF1	PFAM:PF09713
TIGRFAMs:TIGR01589	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:604388915..604395593

Molecular Weight (calculated)

33038.3 Da

IEP (calculated)

4.152

GRAVY (calculated)

-0.403

Length

305 amino acids

Sequence
(BLAST)

001: MTIKRLISDC QDANNACPVP LVQNLIERCL QLYMNQKEVI DTLSLEAKIE PSFTELVWQK LEEENREFFK AYYLRLMLKN QITAFNKLLE DQFQLMNKDY
101: SSGIPSMPLT NGSNSTTLKQ NSCFLPESGP ISAMPNGAMR NGSSGGLING TSSGDQSIYG GKDIHGPHSG MDASTSVLPA QNASALLYGA DNNGTTIKTE
201: SSYSSNADFA FCGNAFLESC QSIGDASAGS FSSSELNGQP LNDALLDMES SSFGFLSQIP QNFSFSDLTE GFNQNTEVLE NYGRSPFLSS EPNNFSDSTG
301: GEHTG

Best Arabidopsis Sequence Match ( AT3G10250.1 )
(BLAST)

001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE

Arabidopsis Description

AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.