Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G313700.1 | Wheat | nucleus | 70.14 | 66.23 |
| TraesCS7A01G413700.1 | Wheat | nucleus | 70.14 | 66.23 |
| TraesCS7D01G407000.1 | Wheat | nucleus | 69.1 | 65.25 |
| KXG29427 | Sorghum | nucleus | 61.46 | 54.97 |
| GSMUA_Achr1P08340_001 | Banana | cytosol | 48.26 | 43.44 |
| GSMUA_Achr11P... | Banana | nucleus | 47.22 | 41.85 |
| GSMUA_Achr10P... | Banana | nucleus | 46.18 | 41.43 |
| Solyc01g005640.2.1 | Tomato | nucleus | 39.58 | 37.87 |
| AT3G10250.5 | Thale cress | mitochondrion, nucleus | 41.67 | 37.04 |
| PGSC0003DMT400076756 | Potato | nucleus | 39.58 | 36.54 |
| PGSC0003DMT400081823 | Potato | nucleus | 40.28 | 36.48 |
| VIT_08s0007g05400.t01 | Wine grape | mitochondrion, nucleus | 40.97 | 36.31 |
| Solyc10g079710.1.1 | Tomato | nucleus | 35.42 | 35.92 |
| Bra029826.1-P | Field mustard | mitochondrion, nucleus | 40.97 | 35.87 |
| KRH66806 | Soybean | nucleus | 41.67 | 35.82 |
| CDY41330 | Canola | mitochondrion, nucleus | 40.62 | 35.78 |
| CDY56714 | Canola | mitochondrion, nucleus | 40.62 | 35.67 |
| KRG95131 | Soybean | nucleus | 41.67 | 35.4 |
| Bra034101.1-P | Field mustard | mitochondrion, nucleus | 39.93 | 35.38 |
| CDY08617 | Canola | mitochondrion, nucleus | 40.28 | 35.26 |
| AT5G04090.6 | Thale cress | nucleus | 38.19 | 34.16 |
| CDY00915 | Canola | mitochondrion, nucleus | 38.89 | 33.73 |
| Solyc10g079590.1.1 | Tomato | nucleus | 36.81 | 33.33 |
| PGSC0003DMT400076729 | Potato | nucleus | 35.07 | 32.37 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 8.33 | 30.38 |
| EES19655 | Sorghum | cytosol | 9.03 | 25.49 |
| KXG31543 | Sorghum | nucleus | 30.9 | 24.59 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 9.38 | 15.79 |
Protein Annotations
| EnsemblPlants:EER90343 | EnsemblPlantsGene:SORBI_3010G255700 | EntrezGene:8064955 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF1 |
| PFAM:PF09713 | ProteinID:EER90343 | ProteinID:EER90343.1 | RefSeq:XP_002438976.1 | SEG:seg | TIGRFAMs:TIGR01589 |
| unigene:Sbi.2714 | UniParc:UPI0001A897C8 | UniProt:C5Z9A3 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr10:-:59419411..59423054
Molecular Weight (calculated)
31510.8 Da
IEP (calculated)
4.154
GRAVY (calculated)
-0.348
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEEVLHKV QNLIERCLQM YMNQKEVVDA LSQHSKIEPC ITELVWRQLE QQNPLFFKAY YMRLMLKNQI MVFNKLLQDQ FEIMNKDFSS GIPSMSLPNG
101: SNSNLLKQNP CFLPETAPGS AMPDGIMHNG SSSGIINGTP SGNQLLNASK DLHGLHNGID ASTSLQSDQN ATTVLYGVDN ETSATIKTES CYSSNADFAF
201: CGNTFLESCQ SIGDASGGGS FSSSELNGQP LNESILDMES SSFSFLNQMP QNFIFSDLAD DFNQSAEITP FLTPETNFSD STGGEHTG
101: SNSNLLKQNP CFLPETAPGS AMPDGIMHNG SSSGIINGTP SGNQLLNASK DLHGLHNGID ASTSLQSDQN ATTVLYGVDN ETSATIKTES CYSSNADFAF
201: CGNTFLESCQ SIGDASGGGS FSSSELNGQP LNESILDMES SSFSFLNQMP QNFIFSDLAD DFNQSAEITP FLTPETNFSD STGGEHTG
001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
Arabidopsis Description
AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.