Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039349_P002 | Maize | nucleus | 97.24 | 96.97 |
| TraesCS3B01G171500.1 | Wheat | nucleus | 87.29 | 88.52 |
| TraesCS3D01G106200.1 | Wheat | nucleus | 87.29 | 88.27 |
| TraesCS3A01G104000.1 | Wheat | unclear | 86.74 | 87.47 |
| TraesCS3A01G144700.2 | Wheat | nucleus | 87.57 | 87.33 |
| TraesCS3B01G122400.1 | Wheat | nucleus | 86.19 | 86.91 |
| TraesCS3D01G153500.1 | Wheat | cytosol | 86.74 | 86.5 |
| Os01t0220200-01 | Rice | cytosol, nucleus, plastid | 26.52 | 79.34 |
| GSMUA_Achr7P14110_001 | Banana | nucleus | 71.82 | 72.02 |
| GSMUA_Achr10P... | Banana | nucleus | 69.34 | 69.53 |
| KRH06484 | Soybean | nucleus | 67.68 | 67.49 |
| KRH47919 | Soybean | nucleus | 66.85 | 67.41 |
| PGSC0003DMT400024865 | Potato | nucleus | 67.96 | 66.67 |
| GSMUA_Achr6P05700_001 | Banana | nucleus | 64.09 | 66.1 |
| KRG97168 | Soybean | nucleus | 65.19 | 65.92 |
| Solyc01g010520.2.1 | Tomato | nucleus | 64.92 | 65.64 |
| VIT_15s0046g00990.t01 | Wine grape | nucleus | 66.57 | 65.49 |
| CDY42046 | Canola | nucleus | 65.75 | 64.67 |
| Bra004538.1-P | Field mustard | nucleus | 64.09 | 64.62 |
| CDX80017 | Canola | nucleus | 63.81 | 64.35 |
| AT3G61700.2 | Thale cress | nucleus | 64.09 | 63.74 |
| GSMUA_Achr6P14310_001 | Banana | nucleus | 64.64 | 63.24 |
| AT2G46420.3 | Thale cress | nucleus | 63.26 | 63.09 |
| Solyc05g007270.2.1 | Tomato | cytosol | 67.13 | 60.15 |
| CDX67857 | Canola | nucleus | 58.84 | 58.2 |
| Bra003465.1-P | Field mustard | nucleus | 58.84 | 58.2 |
| CDY25057 | Canola | nucleus | 57.18 | 57.02 |
| VIT_16s0100g00590.t01 | Wine grape | nucleus | 33.43 | 56.28 |
| CDX71711 | Canola | mitochondrion | 58.01 | 46.77 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 8.56 | 39.24 |
| KXG29427 | Sorghum | nucleus | 30.94 | 34.78 |
| EES19655 | Sorghum | cytosol | 9.39 | 33.33 |
| EER90343 | Sorghum | nucleus | 24.59 | 30.9 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 11.05 | 23.39 |
| Bra007627.1-P | Field mustard | cytosol | 58.01 | 12.77 |
| CDY11376 | Canola | cytosol | 57.73 | 12.71 |
Protein Annotations
| EnsemblPlants:KXG31543 | EnsemblPlantsGene:SORBI_3003G015600 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF9 | PFAM:PF09713 |
| ProteinID:KXG31543 | ProteinID:KXG31543.1 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI00022070FB | UniProt:A0A1B6Q0T8 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:1416907..1423739
Molecular Weight (calculated)
38971.7 Da
IEP (calculated)
4.309
GRAVY (calculated)
-0.387
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDSQDIQST TELQSSAQGT NEVQSQQPNP MATDAPAGNS GSLSVASNDN KKVSREDIEL VQNLIERCLQ LYMNKGEVVR TLSTRARIEP GFTTLVWQKL
101: EEENSEFFRA YYIRLKLKRQ IILFNHLLQH QYNLMKYPAP PNIPLAPIQN GIHHMPVSNL PMGYPVLQQP IMPAPGQPHM DPMACGLSSG HVVNGIPAGG
201: YHPMRMNSGN DMVVDNGAPE APHAAATGSA MSSEMAVSPS SAASSNHAPF TPSEIPGMTM DVSALDSAFG SDVGNPGSLQ LGPDGSSRDS IRSLGQLWNF
301: SLSDLTADLT SLGADLDVLE NYTGTPFLPS DSDILLDSPD QDDIVEYFAD AINGSPSDEE KS
101: EEENSEFFRA YYIRLKLKRQ IILFNHLLQH QYNLMKYPAP PNIPLAPIQN GIHHMPVSNL PMGYPVLQQP IMPAPGQPHM DPMACGLSSG HVVNGIPAGG
201: YHPMRMNSGN DMVVDNGAPE APHAAATGSA MSSEMAVSPS SAASSNHAPF TPSEIPGMTM DVSALDSAFG SDVGNPGSLQ LGPDGSSRDS IRSLGQLWNF
301: SLSDLTADLT SLGADLDVLE NYTGTPFLPS DSDILLDSPD QDDIVEYFAD AINGSPSDEE KS
001: MKNGQELQSS TQVSHESQGE QKVNLSVEAP IQDSGSVSAS SNDGRKVSRQ DIELVQNLIE RCLQLYMSRD EVVKTLLTRA RIDPGFTTLV WQKLEEENAE
101: FFRAYYIRLK LKKQIVVFNH LLEHQYHLTK YNVHSKVPLV PMQNGIHPMA SVNNMPMGYP VLQHPQMHAQ GHPHLDPMSC GMSSCHVVNG VPAPANFQPM
201: RINSGNDMVI DTTMAEPTPM IPPNSGMSDM PVSPASVASS GHFPFAASDM SGMGMDTSAL DSAFTSDVGT SVGLQLGSDG GAGNSRDPLR PFDQIPWNFS
301: LSDLTADLSN LGDLGALGNY PGSPFLPSDS EILLDSPEQE DIDEFFVDSI PGPPCSQSEE DKS
101: FFRAYYIRLK LKKQIVVFNH LLEHQYHLTK YNVHSKVPLV PMQNGIHPMA SVNNMPMGYP VLQHPQMHAQ GHPHLDPMSC GMSSCHVVNG VPAPANFQPM
201: RINSGNDMVI DTTMAEPTPM IPPNSGMSDM PVSPASVASS GHFPFAASDM SGMGMDTSAL DSAFTSDVGT SVGLQLGSDG GAGNSRDPLR PFDQIPWNFS
301: LSDLTADLSN LGDLGALGNY PGSPFLPSDS EILLDSPEQE DIDEFFVDSI PGPPCSQSEE DKS
Arabidopsis Description
At2g46420/F11C10.11 [Source:UniProtKB/TrEMBL;Acc:Q9SKD8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.