Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06484 | Soybean | nucleus | 82.68 | 81.54 |
| KRH47919 | Soybean | nucleus | 81.28 | 81.06 |
| VIT_15s0046g00990.t01 | Wine grape | nucleus | 74.86 | 72.83 |
| Solyc01g010520.2.1 | Tomato | nucleus | 70.67 | 70.67 |
| PGSC0003DMT400024865 | Potato | nucleus | 72.35 | 70.19 |
| CDY42046 | Canola | nucleus | 70.67 | 68.75 |
| AT2G46420.3 | Thale cress | nucleus | 69.55 | 68.59 |
| Bra004538.1-P | Field mustard | nucleus | 68.44 | 68.25 |
| CDX80017 | Canola | nucleus | 68.16 | 67.97 |
| AT3G61700.2 | Thale cress | nucleus | 68.72 | 67.58 |
| KXG31543 | Sorghum | nucleus | 65.92 | 65.19 |
| Zm00001d039349_P002 | Maize | nucleus | 64.8 | 63.91 |
| Solyc05g007270.2.1 | Tomato | cytosol | 70.95 | 62.87 |
| TraesCS3D01G106200.1 | Wheat | nucleus | 62.57 | 62.57 |
| TraesCS3B01G122400.1 | Wheat | nucleus | 62.29 | 62.12 |
| TraesCS3A01G104000.1 | Wheat | unclear | 62.29 | 62.12 |
| GSMUA_Achr7P14110_001 | Banana | nucleus | 62.57 | 62.05 |
| TraesCS3B01G171500.1 | Wheat | nucleus | 61.73 | 61.9 |
| TraesCS3A01G144700.2 | Wheat | nucleus | 62.01 | 61.16 |
| TraesCS3D01G153500.1 | Wheat | cytosol | 61.73 | 60.88 |
| GSMUA_Achr10P... | Banana | nucleus | 60.06 | 59.56 |
| GSMUA_Achr6P05700_001 | Banana | nucleus | 57.26 | 58.4 |
| Zm00001d008954_P002 | Maize | nucleus | 63.69 | 57.72 |
| Os05t0212400-01 | Rice | cytosol, nucleus | 55.87 | 56.34 |
| GSMUA_Achr6P14310_001 | Banana | nucleus | 56.98 | 55.14 |
| Os01t0220200-01 | Rice | cytosol, nucleus, plastid | 18.44 | 54.55 |
| TraesCS1A01G126500.1 | Wheat | cytosol, nucleus, plastid | 40.5 | 50.52 |
| KRG92960 | Soybean | nucleus | 10.89 | 39.8 |
| KRH67570 | Soybean | cytosol | 9.78 | 37.63 |
| KRG95854 | Soybean | cytosol | 9.78 | 37.63 |
| KRH19744 | Soybean | cytosol | 10.06 | 37.5 |
| KRH01576 | Soybean | cytosol | 10.06 | 36.36 |
| KRH70528 | Soybean | nucleus | 11.45 | 36.28 |
| KRH66806 | Soybean | nucleus | 31.56 | 33.73 |
| KRG95131 | Soybean | nucleus | 31.28 | 33.04 |
| KRG99379 | Soybean | cytosol | 8.94 | 31.37 |
| KRH36210 | Soybean | extracellular | 9.5 | 30.63 |
| KRH45644 | Soybean | cytosol | 8.66 | 30.39 |
| KRH18789 | Soybean | nucleus | 19.55 | 19.44 |
Protein Annotations
| EMBL:ACUP02012179 | EnsemblPlants:KRG97168 | EnsemblPlantsGene:GLYMA_19G255200 | EntrezGene:100791101 | InterPro:CHP01589_pln | PANTHER:PTHR31871 |
| PANTHER:PTHR31871:SF9 | PFAM:PF09713 | ProteinID:KRG97168 | ProteinID:KRG97168.1 | ProteinID:KRG97169.1 | ProteinID:KRG97170.1 |
| ProteinID:KRG97171.1 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI000233EEB3 | UniProt:I1NCK6 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr19:+:49981172..49987587
Molecular Weight (calculated)
38865.6 Da
IEP (calculated)
4.728
GRAVY (calculated)
-0.378
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNSQSTQEL QSPAQASRES QSEQPKNHTT DAPVTDSVSA SASSNDSKKI SRQDIDLVQN LIERCLQLYM NKDEVVKTLF ARAKIDPGFT TLVWQKLEEE
101: NTDFFRAYYI RLKLKRQILL FNHLLEHQYH MMKYPLPTKI PLAPIQNGVH PMPVNNLPMG YPVLQKSSIP AAGQPHLDSM GSGISSCHVV NGVLASSNSH
201: PIRISGNGMV MDHSAPVIPP NSAMSSLSEM PVSPTSVASN GHFPFTPSEI SGMGTDTSIL DTAFTSDVAS SVGLQLAPDN GTGISRSLDQ IQWNFSLSDL
301: TADLSNLGDL GALGNYPGSP FMQSDSDILL ESSDQKDIVD DFFANTEPPG SPSDEEKS
101: NTDFFRAYYI RLKLKRQILL FNHLLEHQYH MMKYPLPTKI PLAPIQNGVH PMPVNNLPMG YPVLQKSSIP AAGQPHLDSM GSGISSCHVV NGVLASSNSH
201: PIRISGNGMV MDHSAPVIPP NSAMSSLSEM PVSPTSVASN GHFPFTPSEI SGMGTDTSIL DTAFTSDVAS SVGLQLAPDN GTGISRSLDQ IQWNFSLSDL
301: TADLSNLGDL GALGNYPGSP FMQSDSDILL ESSDQKDIVD DFFANTEPPG SPSDEEKS
001: MKNGQELQSS TQVSHESQGE QKVNLSVEAP IQDSGSVSAS SNDGRKVSRQ DIELVQNLIE RCLQLYMSRD EVVKTLLTRA RIDPGFTTLV WQKLEEENAE
101: FFRAYYIRLK LKKQIVVFNH LLEHQYHLTK YNVHSKVPLV PMQNGIHPMA SVNNMPMGYP VLQHPQMHAQ GHPHLDPMSC GMSSCHVVNG VPAPANFQPM
201: RINSGNDMVI DTTMAEPTPM IPPNSGMSDM PVSPASVASS GHFPFAASDM SGMGMDTSAL DSAFTSDVGT SVGLQLGSDG GAGNSRDPLR PFDQIPWNFS
301: LSDLTADLSN LGDLGALGNY PGSPFLPSDS EILLDSPEQE DIDEFFVDSI PGPPCSQSEE DKS
101: FFRAYYIRLK LKKQIVVFNH LLEHQYHLTK YNVHSKVPLV PMQNGIHPMA SVNNMPMGYP VLQHPQMHAQ GHPHLDPMSC GMSSCHVVNG VPAPANFQPM
201: RINSGNDMVI DTTMAEPTPM IPPNSGMSDM PVSPASVASS GHFPFAASDM SGMGMDTSAL DSAFTSDVGT SVGLQLGSDG GAGNSRDPLR PFDQIPWNFS
301: LSDLTADLSN LGDLGALGNY PGSPFLPSDS EILLDSPEQE DIDEFFVDSI PGPPCSQSEE DKS
Arabidopsis Description
At2g46420/F11C10.11 [Source:UniProtKB/TrEMBL;Acc:Q9SKD8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.