Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039349_P002 | Maize | nucleus | 85.32 | 92.84 |
| TraesCS3D01G106200.1 | Wheat | nucleus | 78.99 | 87.15 |
| TraesCS3B01G171500.1 | Wheat | nucleus | 78.73 | 87.11 |
| TraesCS3A01G104000.1 | Wheat | unclear | 78.23 | 86.07 |
| TraesCS3A01G144700.2 | Wheat | nucleus | 78.99 | 85.95 |
| TraesCS3B01G122400.1 | Wheat | nucleus | 77.72 | 85.52 |
| TraesCS3D01G153500.1 | Wheat | cytosol | 78.23 | 85.12 |
| Os01t0220200-01 | Rice | cytosol, nucleus, plastid | 24.05 | 78.51 |
| GSMUA_Achr7P14110_001 | Banana | nucleus | 65.32 | 71.47 |
| GSMUA_Achr10P... | Banana | nucleus | 64.05 | 70.08 |
| KRH06484 | Soybean | nucleus | 61.52 | 66.94 |
| KRH47919 | Soybean | nucleus | 60.25 | 66.3 |
| GSMUA_Achr6P05700_001 | Banana | nucleus | 58.23 | 65.53 |
| PGSC0003DMT400024865 | Potato | nucleus | 60.76 | 65.04 |
| VIT_15s0046g00990.t01 | Wine grape | nucleus | 60.25 | 64.67 |
| Solyc01g010520.2.1 | Tomato | nucleus | 57.97 | 63.97 |
| KRG97168 | Soybean | nucleus | 57.72 | 63.69 |
| CDY42046 | Canola | nucleus | 59.24 | 63.59 |
| Bra004538.1-P | Field mustard | nucleus | 57.72 | 63.51 |
| CDX80017 | Canola | nucleus | 57.47 | 63.23 |
| AT3G61700.2 | Thale cress | nucleus | 57.97 | 62.91 |
| GSMUA_Achr6P14310_001 | Banana | nucleus | 58.48 | 62.43 |
| AT2G46420.3 | Thale cress | nucleus | 56.96 | 61.98 |
| Solyc05g007270.2.1 | Tomato | cytosol | 60.25 | 58.91 |
| VIT_16s0100g00590.t01 | Wine grape | nucleus | 31.65 | 58.14 |
| CDX67857 | Canola | nucleus | 53.42 | 57.65 |
| Bra003465.1-P | Field mustard | nucleus | 53.42 | 57.65 |
| CDY25057 | Canola | nucleus | 51.9 | 56.47 |
| CDX71711 | Canola | mitochondrion | 51.9 | 45.66 |
| Zm00001d047779_P001 | Maize | nucleus | 7.85 | 38.27 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 7.59 | 37.5 |
| Zm00001d012431_P001 | Maize | cytosol, nucleus, plastid | 9.11 | 34.95 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 7.59 | 30.3 |
| Zm00001d054004_P001 | Maize | nucleus | 25.82 | 29.91 |
| Zm00001d042940_P001 | Maize | nucleus | 11.14 | 23.04 |
| Bra007627.1-P | Field mustard | cytosol | 52.15 | 12.52 |
| CDY11376 | Canola | cytosol | 51.9 | 12.46 |
Protein Annotations
| EnsemblPlants:Zm00001d008954_P002 | EnsemblPlants:Zm00001d008954_T002 | EnsemblPlantsGene:Zm00001d008954 | EntrezGene:100217001 | InterPro:CHP01589_pln | PANTHER:PTHR31871 |
| PANTHER:PTHR31871:SF9 | PFAM:PF09713 | ProteinID:AQK91073.1 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI0008442351 |
| UniProt:A0A1D6FGV0 | MapMan:35.2 | : | : | : | : |
Description
Ectonucleotide pyrophosphatase/phosphodiesterase family member 3
Coordinates
chr8:-:26894967..26903992
Molecular Weight (calculated)
42850.6 Da
IEP (calculated)
4.415
GRAVY (calculated)
-0.300
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDSQDIQST TELQSSAQGT NEVQSQQPNP MTTDAPAGNS GSLSIASNDS KKVSREDIEL VQNLIERCLQ LYMNKGEVVR TLSTRARIEP GFTTLVWQKL
101: EEENSEFFRA YYIRLKLKRQ IILFNHLLQH QYNLMKYPAP PNVPLAPIQN GIHHMPAYAL VMLYPGMHLA CTVDRQAFTV QSLFYHFIAV SNLPMGYPVL
201: PQPIMPAPGQ PHMDPMACGL SNGHVVNGIP APGGYHPMRM NSGNDMVVDN GAPEAPHAGA TGSVMSSEMA VSPSSAASSN HAPFMPPEIP GMAMDVPGLD
301: STFGSDVGNG PLQLGPDGSS RDSIRSLGQL WNFSLSDLTA DLTSLGADLD VLENYTGTPF LPSDSDILLD SPDQDDIVEY FADAINGSQS DEERS
101: EEENSEFFRA YYIRLKLKRQ IILFNHLLQH QYNLMKYPAP PNVPLAPIQN GIHHMPAYAL VMLYPGMHLA CTVDRQAFTV QSLFYHFIAV SNLPMGYPVL
201: PQPIMPAPGQ PHMDPMACGL SNGHVVNGIP APGGYHPMRM NSGNDMVVDN GAPEAPHAGA TGSVMSSEMA VSPSSAASSN HAPFMPPEIP GMAMDVPGLD
301: STFGSDVGNG PLQLGPDGSS RDSIRSLGQL WNFSLSDLTA DLTSLGADLD VLENYTGTPF LPSDSDILLD SPDQDDIVEY FADAINGSQS DEERS
001: MKNGQELQSS TQVSHESQGE QKVNLSVEAP IQDSGSVSAS SNDGRKVSRQ DIELVQNLIE RCLQLYMSRD EVVKTLLTRA RIDPGFTTLV WQKLEEENAE
101: FFRAYYIRLK LKKQIVVFNH LLEHQYHLTK YNVHSKVPLV PMQNGIHPMA SVNNMPMGYP VLQHPQMHAQ GHPHLDPMSC GMSSCHVVNG VPAPANFQPM
201: RINSGNDMVI DTTMAEPTPM IPPNSGMSDM PVSPASVASS GHFPFAASDM SGMGMDTSAL DSAFTSDVGT SVGLQLGSDG GAGNSRDPLR PFDQIPWNFS
301: LSDLTADLSN LGDLGALGNY PGSPFLPSDS EILLDSPEQE DIDEFFVDSI PGPPCSQSEE DKS
101: FFRAYYIRLK LKKQIVVFNH LLEHQYHLTK YNVHSKVPLV PMQNGIHPMA SVNNMPMGYP VLQHPQMHAQ GHPHLDPMSC GMSSCHVVNG VPAPANFQPM
201: RINSGNDMVI DTTMAEPTPM IPPNSGMSDM PVSPASVASS GHFPFAASDM SGMGMDTSAL DSAFTSDVGT SVGLQLGSDG GAGNSRDPLR PFDQIPWNFS
301: LSDLTADLSN LGDLGALGNY PGSPFLPSDS EILLDSPEQE DIDEFFVDSI PGPPCSQSEE DKS
Arabidopsis Description
At2g46420/F11C10.11 [Source:UniProtKB/TrEMBL;Acc:Q9SKD8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.