Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19655 | Sorghum | cytosol | 86.87 | 84.31 |
| Os05t0462000-00 | Rice | cytosol | 82.83 | 80.39 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 80.81 | 80.0 |
| TraesCS1A01G287200.1 | Wheat | cytosol | 76.77 | 76.77 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 75.76 | 76.53 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 75.76 | 76.53 |
| KRG95854 | Soybean | cytosol | 60.61 | 64.52 |
| AT5G02580.1 | Thale cress | cytosol | 58.59 | 63.74 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 58.59 | 63.74 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 61.62 | 63.54 |
| KRH67570 | Soybean | cytosol | 59.6 | 63.44 |
| Bra005731.1-P | Field mustard | cytosol | 57.58 | 62.64 |
| CDY11219 | Canola | cytosol | 57.58 | 62.64 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 60.61 | 61.86 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 48.48 | 60.76 |
| PGSC0003DMT400061428 | Potato | nucleus | 61.62 | 59.8 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 58.59 | 59.79 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 56.57 | 59.57 |
| KRH19744 | Soybean | cytosol | 57.58 | 59.38 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 34.34 | 58.62 |
| CDY72004 | Canola | extracellular | 33.33 | 57.89 |
| Zm00001d012431_P001 | Maize | cytosol, nucleus, plastid | 57.58 | 55.34 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 44.44 | 55.0 |
| GSMUA_Achr10P... | Banana | cytosol | 51.52 | 54.84 |
| Solyc09g005730.2.1 | Tomato | nucleus | 56.57 | 54.37 |
| Zm00001d047779_P001 | Maize | nucleus | 44.44 | 54.32 |
| Solyc10g084600.1.1 | Tomato | nucleus | 54.55 | 49.54 |
| Zm00001d042940_P001 | Maize | nucleus | 58.59 | 30.37 |
| Zm00001d039349_P002 | Maize | nucleus | 30.3 | 8.26 |
| Zm00001d054004_P001 | Maize | nucleus | 26.26 | 7.62 |
| Zm00001d008954_P002 | Maize | nucleus | 30.3 | 7.59 |
Protein Annotations
| EnsemblPlants:Zm00001d038387_P001 | EnsemblPlants:Zm00001d038387_T001 | EnsemblPlantsGene:Zm00001d038387 | EntrezGene:103630439 | InterPro:CHP01589_pln | PANTHER:PTHR31871 |
| PANTHER:PTHR31871:SF2 | PFAM:PF09713 | ProteinID:AQK86503.1 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI0002207696 |
| UniProt:A0A1D6M5Y8 | MapMan:35.2 | : | : | : | : |
Description
plant-specific domain TIGR01589 family protein expressed
Coordinates
chr6:-:156102753..156103963
Molecular Weight (calculated)
11298.3 Da
IEP (calculated)
4.835
GRAVY (calculated)
-0.737
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MGDSSSSSAA YIKMVHHMIE KCICFNLSKE ECMDALEKHA NVKPVVTSTV WKELEKENKE FFETYNKDRE ERKVEAETMA RIEKMLSEAA ASKSSDDEG
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.