Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 94.51 | 94.51 |
| CDY11219 | Canola | cytosol | 93.41 | 93.41 |
| Bra005731.1-P | Field mustard | cytosol | 93.41 | 93.41 |
| CDY72004 | Canola | extracellular | 54.95 | 87.72 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 63.74 | 58.59 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 59.34 | 57.45 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 60.44 | 57.29 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 49.45 | 56.96 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 49.45 | 56.96 |
| Os05t0462000-00 | Rice | cytosol | 63.74 | 56.86 |
| AT3G28990.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 54.95 | 56.82 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 49.45 | 56.25 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 60.44 | 56.12 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 60.44 | 56.12 |
| EES19655 | Sorghum | cytosol | 62.64 | 55.88 |
| PGSC0003DMT400061428 | Potato | nucleus | 62.64 | 55.88 |
| TraesCS1A01G287200.1 | Wheat | cytosol | 60.44 | 55.56 |
| Zm00001d047779_P001 | Maize | nucleus | 49.45 | 55.56 |
| KRH19744 | Soybean | cytosol | 58.24 | 55.21 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 60.44 | 55.0 |
| AT3G55240.1 | Thale cress | nucleus | 57.14 | 54.74 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 58.24 | 54.64 |
| Solyc09g005730.2.1 | Tomato | nucleus | 61.54 | 54.37 |
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 46.15 | 53.85 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 57.14 | 53.61 |
| GSMUA_Achr7P15290_001 | Banana | cytosol | 43.96 | 51.28 |
| GSMUA_Achr10P... | Banana | cytosol | 51.65 | 50.54 |
| TraesCS3A01G355400.1 | Wheat | cytosol, nucleus, plastid | 52.75 | 50.53 |
| TraesCS3D01G349400.1 | Wheat | cytosol, nucleus, plastid | 52.75 | 50.53 |
| Solyc10g084600.1.1 | Tomato | nucleus | 60.44 | 50.46 |
| TraesCS3B01G388300.1 | Wheat | cytosol, nucleus, plastid | 52.75 | 50.0 |
| HORVU3Hr1G087010.1 | Barley | cytosol, nucleus, plastid | 52.75 | 48.0 |
| Os01t0837600-01 | Rice | cytosol, nucleus, plastid | 51.65 | 46.08 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 40.66 | 42.53 |
| Zm00001d012431_P001 | Maize | cytosol, nucleus, plastid | 47.25 | 41.75 |
| TraesCS4B01G202900.2 | Wheat | cytosol | 36.26 | 34.02 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 46.15 | 33.87 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 47.25 | 30.07 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 51.65 | 27.49 |
| TraesCS4D01G203800.1 | Wheat | mitochondrion | 46.15 | 26.75 |
| AT1G10657.1 | Thale cress | cytosol | 36.26 | 26.4 |
| Zm00001d042940_P001 | Maize | nucleus | 49.45 | 23.56 |
| AT3G10250.5 | Thale cress | mitochondrion, nucleus | 36.26 | 10.19 |
| AT5G04090.6 | Thale cress | nucleus | 35.16 | 9.94 |
| AT2G46420.3 | Thale cress | nucleus | 35.16 | 8.82 |
| AT3G61700.2 | Thale cress | nucleus | 35.16 | 8.79 |
Protein Annotations
| MapMan:35.2 | EntrezGene:831095 | UniProt:A0A178UEX4 | ProteinID:AED90493.1 | EMBL:AK227439 | ArrayExpress:AT5G02580 |
| EnsemblPlantsGene:AT5G02580 | RefSeq:AT5G02580 | TAIR:AT5G02580 | RefSeq:AT5G02580-TAIR-G | EnsemblPlants:AT5G02580.1 | TAIR:AT5G02580.1 |
| Unigene:At.33400 | EMBL:BT005835 | InterPro:CHP01589_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016829 |
| RefSeq:NP_568103.3 | ProteinID:OAO92358.1 | PFAM:PF09713 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF3 | UniProt:Q84TG0 | TIGRFAMs:TIGR01589 |
| UniParc:UPI0000060D5F | SEG:seg | : | : | : | : |
Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
Coordinates
chr5:+:579744..580787
Molecular Weight (calculated)
10775.9 Da
IEP (calculated)
6.675
GRAVY (calculated)
-0.609
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.