Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 68.97 | 76.92 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 62.07 | 68.35 |
| Zm00001d047779_P001 | Maize | nucleus | 60.92 | 65.43 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 57.47 | 62.5 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 87.36 | 61.29 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 37.93 | 56.9 |
| KRG95854 | Soybean | cytosol | 54.02 | 50.54 |
| KRH67570 | Soybean | cytosol | 54.02 | 50.54 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 54.02 | 50.0 |
| GSMUA_Achr7P15290_001 | Banana | cytosol | 44.83 | 50.0 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 81.61 | 49.65 |
| PGSC0003DMT400061428 | Potato | nucleus | 56.32 | 48.04 |
| TraesCS4B01G202900.2 | Wheat | cytosol | 52.87 | 47.42 |
| KRH19744 | Soybean | cytosol | 51.72 | 46.88 |
| Solyc09g005730.2.1 | Tomato | nucleus | 54.02 | 45.63 |
| TraesCS4D01G203800.1 | Wheat | mitochondrion | 80.46 | 44.59 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 50.57 | 44.0 |
| Solyc10g084600.1.1 | Tomato | nucleus | 51.72 | 41.28 |
| AT5G02580.1 | Thale cress | cytosol | 42.53 | 40.66 |
| CDY11219 | Canola | cytosol | 42.53 | 40.66 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 42.53 | 40.66 |
| Bra005731.1-P | Field mustard | cytosol | 42.53 | 40.66 |
| CDY72004 | Canola | extracellular | 25.29 | 38.6 |
| HORVU3Hr1G087010.1 | Barley | cytosol, nucleus, plastid | 42.53 | 37.0 |
| HORVU6Hr1G018770.3 | Barley | plastid | 32.18 | 6.83 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G023250.1 | EnsemblPlantsGene:HORVU4Hr1G023250 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 | PFAM:PF09713 |
| SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI000B469AA0 | UniProt:A0A287NJA8 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr4H:-:124738432..124738946
Molecular Weight (calculated)
8792.4 Da
IEP (calculated)
7.420
GRAVY (calculated)
-0.714
Length
87 amino acids
Sequence
(BLAST)
(BLAST)
1: XXXXXXXXXX XIRMVHHLIE KCMTFGMSME ECMEALSKRA DVQPVVTSTV WKELEKENKE FFDRYNKQLR SEREGRSSSG SSSNSSS
1: MRHSSPAVYI HLVQHMIETC LTFNMSKEEC MEALSENANI NPIITSTVWK ELVKENKDFF ETYEQKLMKK ESMSEEETNQ LIQNIISL
Arabidopsis Description
Plant protein 1589 of unknown function [Source:TAIR;Acc:AT3G28990]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.