Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 54.64 | 67.95 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 54.64 | 67.09 |
| Zm00001d047779_P001 | Maize | nucleus | 53.61 | 64.2 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 51.55 | 62.5 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 47.42 | 52.87 |
| CDY72004 | Canola | extracellular | 27.84 | 47.37 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 57.73 | 45.16 |
| GSMUA_Achr7P15290_001 | Banana | cytosol | 34.02 | 42.31 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 59.79 | 40.56 |
| KRH19744 | Soybean | cytosol | 39.18 | 39.58 |
| KRG95854 | Soybean | cytosol | 37.11 | 38.71 |
| KRH67570 | Soybean | cytosol | 37.11 | 38.71 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 37.11 | 38.3 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 37.11 | 36.73 |
| TraesCS3B01G388300.1 | Wheat | cytosol, nucleus, plastid | 36.08 | 36.46 |
| PGSC0003DMT400061428 | Potato | nucleus | 38.14 | 36.27 |
| AT5G02580.1 | Thale cress | cytosol | 34.02 | 36.26 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 21.65 | 36.21 |
| Solyc09g005730.2.1 | Tomato | nucleus | 38.14 | 35.92 |
| TraesCS4D01G203800.1 | Wheat | mitochondrion | 57.73 | 35.67 |
| CDY11219 | Canola | cytosol | 31.96 | 34.07 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 31.96 | 34.07 |
| Bra005731.1-P | Field mustard | cytosol | 31.96 | 34.07 |
| Solyc10g084600.1.1 | Tomato | nucleus | 38.14 | 33.95 |
| TraesCS7B01G313700.1 | Wheat | nucleus | 21.65 | 6.89 |
| TraesCS3B01G122400.1 | Wheat | nucleus | 24.74 | 6.69 |
| TraesCS3B01G171500.1 | Wheat | nucleus | 23.71 | 6.44 |
| TraesCS6B01G134100.4 | Wheat | extracellular | 21.65 | 6.21 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G202900.2 | EnsemblPlantsGene:TraesCS4B01G202900 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 | PFAM:PF09713 |
| SEG:seg | TIGRFAMs:TIGR01589 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4B:-:434193780..434194274
Molecular Weight (calculated)
10771.1 Da
IEP (calculated)
7.856
GRAVY (calculated)
-0.153
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MALGDDSPAS YIRMVHHLIE KCMTFGMSME ECMEALSKRA DVQPVVTSTG RPVSNQLLLP LISRNIFICT DAELACLQCG KSWRRRTRSS STDTTSS
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTG THIIDRYMVV WYNSNL
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.