Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G02580.1 | Thale cress | cytosol | 87.72 | 54.95 |
| CDY53585 | Canola | cytosol | 49.12 | 52.83 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 82.46 | 51.65 |
| CDY11219 | Canola | cytosol | 82.46 | 51.65 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 56.14 | 40.51 |
| CDY20432 | Canola | cytosol | 52.63 | 37.97 |
| KRH19744 | Soybean | cytosol | 61.4 | 36.46 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 59.65 | 36.17 |
| CDX76114 | Canola | nucleus | 59.65 | 35.79 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 57.89 | 34.38 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 47.37 | 34.18 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 57.89 | 34.02 |
| Solyc09g005730.2.1 | Tomato | nucleus | 61.4 | 33.98 |
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 47.37 | 33.75 |
| CDY02930 | Canola | nucleus | 56.14 | 33.68 |
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 45.61 | 33.33 |
| Os05t0462000-00 | Rice | cytosol | 59.65 | 33.33 |
| PGSC0003DMT400061428 | Potato | nucleus | 59.65 | 33.33 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 57.89 | 33.33 |
| Zm00001d047779_P001 | Maize | nucleus | 47.37 | 33.33 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 56.14 | 32.99 |
| CDY40206 | Canola | nucleus | 54.39 | 32.63 |
| TraesCS3D01G349400.1 | Wheat | cytosol, nucleus, plastid | 54.39 | 32.63 |
| CDX73396 | Canola | nucleus | 54.39 | 32.63 |
| TraesCS3A01G355400.1 | Wheat | cytosol, nucleus, plastid | 54.39 | 32.63 |
| Os01t0837600-01 | Rice | cytosol, nucleus, plastid | 57.89 | 32.35 |
| TraesCS3B01G388300.1 | Wheat | cytosol, nucleus, plastid | 54.39 | 32.29 |
| GSMUA_Achr7P15290_001 | Banana | cytosol | 43.86 | 32.05 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 56.14 | 32.0 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 54.39 | 31.63 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 54.39 | 31.63 |
| EES19655 | Sorghum | cytosol | 56.14 | 31.37 |
| TraesCS1A01G287200.1 | Wheat | cytosol | 54.39 | 31.31 |
| Solyc10g084600.1.1 | Tomato | nucleus | 59.65 | 31.19 |
| GSMUA_Achr10P... | Banana | cytosol | 50.88 | 31.18 |
| HORVU3Hr1G087010.1 | Barley | cytosol, nucleus, plastid | 54.39 | 31.0 |
| TraesCS4B01G202900.2 | Wheat | cytosol | 47.37 | 27.84 |
| Zm00001d012431_P001 | Maize | cytosol, nucleus, plastid | 49.12 | 27.18 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 38.6 | 25.29 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 47.37 | 21.77 |
| CDX93395 | Canola | cytosol | 35.09 | 19.8 |
| CDY37956 | Canola | cytosol | 35.09 | 19.8 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 47.37 | 18.88 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 52.63 | 17.54 |
| TraesCS4D01G203800.1 | Wheat | mitochondrion | 47.37 | 17.2 |
| Zm00001d042940_P001 | Maize | nucleus | 50.88 | 15.18 |
| CDY25057 | Canola | nucleus | 33.33 | 5.23 |
| CDY00915 | Canola | mitochondrion, nucleus | 29.82 | 5.12 |
| CDX67857 | Canola | nucleus | 31.58 | 4.92 |
| CDY41330 | Canola | mitochondrion, nucleus | 28.07 | 4.89 |
| CDY42046 | Canola | nucleus | 31.58 | 4.89 |
| CDY56714 | Canola | mitochondrion, nucleus | 28.07 | 4.88 |
| CDY08617 | Canola | mitochondrion, nucleus | 28.07 | 4.86 |
| CDX80017 | Canola | nucleus | 29.82 | 4.74 |
| CDX71711 | Canola | mitochondrion | 33.33 | 4.23 |
| CDY11376 | Canola | cytosol | 33.33 | 1.16 |
Protein Annotations
| EnsemblPlants:CDY72004 | EnsemblPlantsGene:GSBRNA2T00023096001 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 | PFAM:PF09713 |
| ProteinID:CDY72004 | ProteinID:CDY72004.1 | TIGRFAMs:TIGR01589 | UniParc:UPI0004EF277D | UniProt:A0A078JZ90 | MapMan:35.2 |
Description
BnaCnng75530DBnaCnng75530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZ90]
Coordinates
chrLK048510:+:1963..2278
Molecular Weight (calculated)
6450.7 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.333
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MGHNSSQASY IHLVHHLIEE CIVFNMGKEE CMDALFKHAN IKPIITSTGE HTHNTHP
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTG THIIDRYMVV WYNSNL
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.