Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0462000-00 | Rice | cytosol | 89.22 | 89.22 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 84.31 | 86.87 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 84.31 | 86.0 |
| TraesCS1A01G287200.1 | Wheat | cytosol | 83.33 | 85.86 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 82.35 | 85.71 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 82.35 | 85.71 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 61.76 | 64.95 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 57.84 | 64.84 |
| Bra005731.1-P | Field mustard | cytosol | 56.86 | 63.74 |
| CDY11219 | Canola | cytosol | 56.86 | 63.74 |
| AT5G02580.1 | Thale cress | cytosol | 55.88 | 62.64 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 58.82 | 62.5 |
| KRG95854 | Soybean | cytosol | 56.86 | 62.37 |
| KRH67570 | Soybean | cytosol | 55.88 | 61.29 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 47.06 | 60.76 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 56.86 | 59.79 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 54.9 | 59.57 |
| GSMUA_Achr10P... | Banana | cytosol | 53.92 | 59.14 |
| PGSC0003DMT400061428 | Potato | nucleus | 56.86 | 56.86 |
| CDY72004 | Canola | extracellular | 31.37 | 56.14 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 43.14 | 55.7 |
| KRH19744 | Soybean | cytosol | 51.96 | 55.21 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 30.39 | 53.45 |
| Solyc09g005730.2.1 | Tomato | nucleus | 52.94 | 52.43 |
| Solyc10g084600.1.1 | Tomato | nucleus | 50.98 | 47.71 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 58.82 | 35.09 |
| KXG31543 | Sorghum | nucleus | 33.33 | 9.39 |
| EER90343 | Sorghum | nucleus | 25.49 | 9.03 |
| KXG29427 | Sorghum | nucleus | 25.49 | 8.07 |
Protein Annotations
| EnsemblPlants:EES19655 | EnsemblPlantsGene:SORBI_3009G165200 | EntrezGene:8061776 | InterPro:CHP01589_pln | ncoils:Coil | PANTHER:PTHR31871 |
| PANTHER:PTHR31871:SF2 | PFAM:PF09713 | ProteinID:EES19655 | ProteinID:EES19655.1 | RefSeq:XP_002441225.1 | SEG:seg |
| TIGRFAMs:TIGR01589 | unigene:Sbi.11251 | UniParc:UPI0001A89574 | UniProt:C5YZB2 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr9:-:52143758..52145074
Molecular Weight (calculated)
11767.7 Da
IEP (calculated)
4.349
GRAVY (calculated)
-0.840
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSSSSASY IRMVHHMIEK CICFNLNKEE CMDALEKHAN VNPVVTATVW KELEKENKEF FETYNKEREE RNIIEAETME RIQKMLSEAA ASKSSDDDDD
101: DG
101: DG
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.