Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0137100-01 | Rice | nucleus | 83.54 | 81.76 |
| TraesCS6A01G104900.1 | Wheat | nucleus | 78.57 | 78.09 |
| TraesCS6D01G093800.1 | Wheat | nucleus | 78.26 | 77.78 |
| TraesCS6B01G134100.4 | Wheat | extracellular | 75.47 | 71.89 |
| Zm00001d054004_P001 | Maize | nucleus | 75.78 | 71.55 |
| HORVU6Hr1G018770.3 | Barley | plastid | 78.57 | 61.71 |
| EER90343 | Sorghum | nucleus | 54.97 | 61.46 |
| GSMUA_Achr11P... | Banana | nucleus | 58.07 | 57.54 |
| GSMUA_Achr1P08340_001 | Banana | cytosol | 55.28 | 55.62 |
| GSMUA_Achr10P... | Banana | nucleus | 55.28 | 55.45 |
| AT3G10250.5 | Thale cress | mitochondrion, nucleus | 49.07 | 48.77 |
| CDY08617 | Canola | mitochondrion, nucleus | 48.45 | 47.42 |
| KRH66806 | Soybean | nucleus | 49.07 | 47.16 |
| Bra029826.1-P | Field mustard | mitochondrion, nucleus | 48.14 | 47.11 |
| KRG95131 | Soybean | nucleus | 49.38 | 46.9 |
| PGSC0003DMT400076756 | Potato | nucleus | 45.34 | 46.79 |
| VIT_08s0007g05400.t01 | Wine grape | mitochondrion, nucleus | 47.2 | 46.77 |
| CDY56714 | Canola | mitochondrion, nucleus | 46.89 | 46.04 |
| CDY41330 | Canola | mitochondrion, nucleus | 46.58 | 45.87 |
| Bra034101.1-P | Field mustard | mitochondrion, nucleus | 46.27 | 45.85 |
| CDY00915 | Canola | mitochondrion, nucleus | 46.58 | 45.18 |
| AT5G04090.6 | Thale cress | nucleus | 44.72 | 44.72 |
| PGSC0003DMT400076729 | Potato | nucleus | 42.55 | 43.91 |
| Solyc10g079710.1.1 | Tomato | nucleus | 38.51 | 43.66 |
| Solyc10g079590.1.1 | Tomato | nucleus | 42.24 | 42.77 |
| PGSC0003DMT400081823 | Potato | nucleus | 39.13 | 39.62 |
| Solyc01g005640.2.1 | Tomato | nucleus | 36.96 | 39.53 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 8.39 | 34.18 |
| KXG31543 | Sorghum | nucleus | 34.78 | 30.94 |
| EES19655 | Sorghum | cytosol | 8.07 | 25.49 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 9.63 | 18.13 |
Protein Annotations
| EnsemblPlants:KXG29427 | EnsemblPlantsGene:SORBI_3004G034400 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF1 | PFAM:PF09713 |
| ProteinID:KXG29427 | ProteinID:KXG29427.1 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI0003C725A2 | UniProt:A0A194YMJ9 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:2776266..2779920
Molecular Weight (calculated)
35349.9 Da
IEP (calculated)
4.260
GRAVY (calculated)
-0.475
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGEDVRKV SRQDIQLVQN LIERCLQLYM NQKEVVDTLS FQAKIEPSFT ELVWQKLEEE NRDFFKAYYV RLMLMNQIMA FNKLLEQQYQ IMTKDHPSGM
101: PSMPPAAPNG SNSNTLNQNV PFLPDTIPST AMQDNLLHNG GSSSIVNGAP SNDQFIYAGK VVHGLPGGMD ASSSLLAAHN STVGQFNGHN GATIKTESGY
201: SSNSDFGFGN ENVFLEQSVG DVSGGSFSSS ELNGQPLGDP ILDMDSSSYG FLSQIPRNFS FSDLTEDFSH SAEILENYGR SPFIPSEANN FPESTTGEHT
301: EIGNRRLDTI SEGVHFEDFG SE
101: PSMPPAAPNG SNSNTLNQNV PFLPDTIPST AMQDNLLHNG GSSSIVNGAP SNDQFIYAGK VVHGLPGGMD ASSSLLAAHN STVGQFNGHN GATIKTESGY
201: SSNSDFGFGN ENVFLEQSVG DVSGGSFSSS ELNGQPLGDP ILDMDSSSYG FLSQIPRNFS FSDLTEDFSH SAEILENYGR SPFIPSEANN FPESTTGEHT
301: EIGNRRLDTI SEGVHFEDFG SE
001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
Arabidopsis Description
AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.