Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29427 | Sorghum | nucleus | 81.76 | 83.54 |
| TraesCS6A01G104900.1 | Wheat | nucleus | 79.94 | 81.17 |
| TraesCS6D01G093800.1 | Wheat | nucleus | 79.64 | 80.86 |
| TraesCS6B01G134100.4 | Wheat | extracellular | 76.6 | 74.56 |
| HORVU6Hr1G018770.3 | Barley | plastid | 80.24 | 64.39 |
| Zm00001d054004_P001 | Maize | nucleus | 65.96 | 63.64 |
| GSMUA_Achr11P... | Banana | nucleus | 58.97 | 59.69 |
| GSMUA_Achr10P... | Banana | nucleus | 56.84 | 58.26 |
| GSMUA_Achr1P08340_001 | Banana | cytosol | 56.53 | 58.12 |
| AT3G10250.5 | Thale cress | mitochondrion, nucleus | 49.24 | 50.0 |
| KRH66806 | Soybean | nucleus | 50.76 | 49.85 |
| VIT_08s0007g05400.t01 | Wine grape | mitochondrion, nucleus | 48.94 | 49.54 |
| KRG95131 | Soybean | nucleus | 50.76 | 49.26 |
| Bra029826.1-P | Field mustard | mitochondrion, nucleus | 48.33 | 48.33 |
| PGSC0003DMT400076756 | Potato | nucleus | 45.59 | 48.08 |
| CDY08617 | Canola | mitochondrion, nucleus | 48.02 | 48.02 |
| CDY56714 | Canola | mitochondrion, nucleus | 47.42 | 47.56 |
| CDY41330 | Canola | mitochondrion, nucleus | 47.11 | 47.4 |
| Bra034101.1-P | Field mustard | mitochondrion, nucleus | 46.81 | 47.38 |
| CDY00915 | Canola | mitochondrion, nucleus | 46.81 | 46.39 |
| AT5G04090.6 | Thale cress | nucleus | 44.38 | 45.34 |
| Solyc10g079590.1.1 | Tomato | nucleus | 42.86 | 44.34 |
| PGSC0003DMT400076729 | Potato | nucleus | 41.95 | 44.23 |
| Solyc10g079710.1.1 | Tomato | nucleus | 37.99 | 44.01 |
| PGSC0003DMT400081823 | Potato | nucleus | 41.03 | 42.45 |
| Solyc01g005640.2.1 | Tomato | nucleus | 38.3 | 41.86 |
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 9.42 | 39.74 |
| Os01t0837600-01 | Rice | cytosol, nucleus, plastid | 10.94 | 35.29 |
| Os05t0462000-00 | Rice | cytosol | 10.64 | 34.31 |
| Os05t0212400-01 | Rice | cytosol, nucleus | 32.22 | 29.86 |
| Os01t0220200-01 | Rice | cytosol, nucleus, plastid | 10.94 | 29.75 |
Protein Annotations
| EMBL:AK073353 | EnsemblPlants:Os02t0137100-01 | EnsemblPlantsGene:Os02g0137100 | EntrezGene:4328235 | InterPro:CHP01589_pln | PANTHER:PTHR31871 |
| PANTHER:PTHR31871:SF1 | PFAM:PF09713 | ProteinID:BAF07741.1 | ProteinID:BAS76876.1 | RefSeq:XP_015625361.1 | SEG:seg |
| TIGRFAMs:TIGR01589 | UniParc:UPI0000DF0531 | UniProt:Q0E447 | MapMan:35.2 | : | : |
Description
Similar to plant-specific domain TIGR01589 family protein. (Os02t0137100-01)
Coordinates
chr2:+:1967733..1972800
Molecular Weight (calculated)
35991.7 Da
IEP (calculated)
4.143
GRAVY (calculated)
-0.471
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MREASGMSGG EDVRKVSRQD IQLVQNLIER CLQLYMNQKE VVETLSFQAK IEPSFTELVW QKLEEENREF FKAYYVRLML KNQIMVFNKL LEDQYRLMCK
101: EQPSGVPSMP PTTNGSNMGT LNQNACFLPD TTPSTAMPDS LLPNGSSSGI VNGTPSSDQF IYAGKVIHGL PSSMDASSSL LAAHNSTAGR FNGDNGTTIK
201: TEASYSGNSD FGFCNESAFL EPCQSIGDAS GGSFSSSELN GQPLGDPIMD MDSSSFGFLS QIPRNFSFSD LTEDFSQSAE ILENYGRSPF IPSEPNNFSE
301: STPGDHAEIG NRRLDTISEG VSYEDFGSD
101: EQPSGVPSMP PTTNGSNMGT LNQNACFLPD TTPSTAMPDS LLPNGSSSGI VNGTPSSDQF IYAGKVIHGL PSSMDASSSL LAAHNSTAGR FNGDNGTTIK
201: TEASYSGNSD FGFCNESAFL EPCQSIGDAS GGSFSSSELN GQPLGDPIMD MDSSSFGFLS QIPRNFSFSD LTEDFSQSAE ILENYGRSPF IPSEPNNFSE
301: STPGDHAEIG NRRLDTISEG VSYEDFGSD
001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
Arabidopsis Description
AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.