Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G071910.1 | Barley | cytosol | 88.24 | 90.0 |
| EES19655 | Sorghum | cytosol | 89.22 | 89.22 |
| TraesCS1A01G287200.1 | Wheat | cytosol | 86.27 | 88.89 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 85.29 | 88.78 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 85.29 | 88.78 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 80.39 | 82.83 |
| KRG95854 | Soybean | cytosol | 63.73 | 69.89 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 64.71 | 68.75 |
| KRH67570 | Soybean | cytosol | 61.76 | 67.74 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 63.73 | 67.01 |
| Bra005731.1-P | Field mustard | cytosol | 58.82 | 65.93 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 58.82 | 65.93 |
| CDY11219 | Canola | cytosol | 58.82 | 65.93 |
| AT5G02580.1 | Thale cress | cytosol | 56.86 | 63.74 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 49.02 | 63.29 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 57.84 | 62.77 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 58.82 | 61.86 |
| GSMUA_Achr10P... | Banana | cytosol | 55.88 | 61.29 |
| PGSC0003DMT400061428 | Potato | nucleus | 60.78 | 60.78 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 34.31 | 60.34 |
| Os01t0837600-01 | Rice | cytosol, nucleus, plastid | 59.8 | 59.8 |
| CDY72004 | Canola | extracellular | 33.33 | 59.65 |
| KRH19744 | Soybean | cytosol | 55.88 | 59.38 |
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 45.1 | 58.97 |
| Solyc09g005730.2.1 | Tomato | nucleus | 56.86 | 56.31 |
| Solyc10g084600.1.1 | Tomato | nucleus | 55.88 | 52.29 |
| Os01t0220200-01 | Rice | cytosol, nucleus, plastid | 17.65 | 14.88 |
| Os02t0137100-01 | Rice | nucleus | 34.31 | 10.64 |
| Os05t0212400-01 | Rice | cytosol, nucleus | 36.27 | 10.42 |
Protein Annotations
| EnsemblPlants:Os05t0462000-00 | EnsemblPlantsGene:Os05g0462000 | EntrezGene:4339025 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 |
| PFAM:PF09713 | ProteinID:AAT39177.1 | ProteinID:AAT39184.1 | ProteinID:BAF17679.1 | ProteinID:BAS94417.1 | ProteinID:EEE63995.1 |
| RefSeq:XP_015638792.1 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI000037804A | UniProt:Q6L4Z7 | MapMan:35.2 |
Description
Similar to plant-specific domain TIGR01589 family protein. (Os05t0462000-00)
Coordinates
chr5:-:22678313..22679102
Molecular Weight (calculated)
11722.6 Da
IEP (calculated)
4.396
GRAVY (calculated)
-0.871
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSSSSASY IRMVHHLIEK CICFNLNKEE CMEALEKHAN INPVVTSTVW KELEKENKEF FETYNKDRAE RNIEAETMQR IQKMLSDAAA SKGSDDDDDD
101: ES
101: ES
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.