Factsheet for Os05t0212400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G126500.1	Wheat	cytosol, nucleus, plastid	52.11	64.46
GSMUA_Achr7P14110_001	Banana	nucleus	60.85	59.83
KRH06484	Soybean	nucleus	60.56	59.23
GSMUA_Achr10P...	Banana	nucleus	60.0	59.0
GSMUA_Achr6P05700_001	Banana	nucleus	58.03	58.69
KRH47919	Soybean	nucleus	58.87	58.22
Os01t0220200-01	Rice	cytosol, nucleus, plastid	19.72	57.85
Bra004538.1-P	Field mustard	nucleus	58.31	57.66
CDX80017	Canola	nucleus	58.03	57.38
VIT_15s0046g00990.t01	Wine grape	nucleus	59.44	57.34
Solyc01g010520.2.1	Tomato	nucleus	57.75	57.26
PGSC0003DMT400024865	Potato	nucleus	59.15	56.91
CDY42046	Canola	nucleus	58.59	56.52
KRG97168	Soybean	nucleus	56.34	55.87
AT2G46420.3	Thale cress	nucleus	55.77	54.55
GSMUA_Achr6P14310_001	Banana	nucleus	56.06	53.78
AT3G61700.2	Thale cress	nucleus	54.65	53.3
Solyc05g007270.2.1	Tomato	cytosol	60.28	52.97
VIT_16s0100g00590.t01	Wine grape	nucleus	31.27	51.63
CDY25057	Canola	nucleus	52.11	50.96
CDX67857	Canola	nucleus	52.11	50.55
Bra003465.1-P	Field mustard	nucleus	52.11	50.55
Os03t0280400-01	Rice	cytosol, nucleus, plastid	9.3	42.31
CDX71711	Canola	mitochondrion	51.27	40.53
Os01t0837600-01	Rice	cytosol, nucleus, plastid	10.42	36.27
Os05t0462000-00	Rice	cytosol	10.42	36.27
Os02t0137100-01	Rice	nucleus	29.86	32.22
CDY11376	Canola	cytosol	51.27	11.06
Bra007627.1-P	Field mustard	cytosol	50.99	11.0

Protein Annotations

EnsemblPlants:Os05t0212400-01	EnsemblPlantsGene:Os05g0212400	InterPro:CHP01589_pln	PANTHER:PTHR31871	PANTHER:PTHR31871:SF9	PFAM:PF09713
ProteinID:BAS92805.1	SEG:seg	TIGRFAMs:TIGR01589	UniParc:UPI00039389AA	UniProt:A0A0P0WJF5	MapMan:35.2

Description

Similar to Uncharacterized plant-specific domain TIGR01589 family protein. (Os05t0212400-01)

Coordinates

chr5:-:6957483..6964188

Molecular Weight (calculated)

38471.8 Da

IEP (calculated)

4.265

GRAVY (calculated)

-0.481

Length

355 amino acids

Sequence
(BLAST)

001: EQPFKIPSAH EDVESKAKVH PLVQGDDEIK GEQPNTDAPL GDSDSLSAAS NDNKRVSRED IELVQNLIER CLQLYMNRGE VVRTLSTRAR IEPGFTTLVW
101: QKLEEENSEF FRAYYIRLKL KKQINLFNHL LEHQYHLMKY PVPQQVPLTP TQNGIRPMPV NNLPMGYPVL QQPGIPAPVQ PHVNSISCGP PGCHVVNGIP
201: APGGYNPIRM SSGNGMTENE VPGTAHAGAM SSEMAVSPSS AMSSNHVSFT PDISGMDVDA STVNATFGDD LGNGGPLQIG PNGGDSSSLG QQIWDFSLSD
301: LSADLTNLGD LAALENYSGN PFLPSDSDIF ESPDDDIVEY FADAINGPSQ SDEEK

Best Arabidopsis Sequence Match ( AT2G46420.1 )
(BLAST)

001: MKNGQELQSS TQVSHESQGE QKVNLSVEAP IQDSGSVSAS SNDGRKVSRQ DIELVQNLIE RCLQLYMSRD EVVKTLLTRA RIDPGFTTLV WQKLEEENAE
101: FFRAYYIRLK LKKQIVVFNH LLEHQYHLTK YNVHSKVPLV PMQNGIHPMA SVNNMPMGYP VLQHPQMHAQ GHPHLDPMSC GMSSCHVVNG VPAPANFQPM
201: RINSGNDMVI DTTMAEPTPM IPPNSGMSDM PVSPASVASS GHFPFAASDM SGMGMDTSAL DSAFTSDVGT SVGLQLGSDG GAGNSRDPLR PFDQIPWNFS
301: LSDLTADLSN LGDLGALGNY PGSPFLPSDS EILLDSPEQE DIDEFFVDSI PGPPCSQSEE DKS

Arabidopsis Description

At2g46420/F11C10.11 [Source:UniProtKB/TrEMBL;Acc:Q9SKD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.