Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47919 | Soybean | nucleus | 94.77 | 95.82 |
| KRG97168 | Soybean | nucleus | 81.54 | 82.68 |
| VIT_15s0046g00990.t01 | Wine grape | nucleus | 80.17 | 79.08 |
| Bra004538.1-P | Field mustard | nucleus | 74.93 | 75.77 |
| CDY42046 | Canola | nucleus | 76.58 | 75.54 |
| CDX80017 | Canola | nucleus | 74.66 | 75.49 |
| PGSC0003DMT400024865 | Potato | nucleus | 76.03 | 74.8 |
| Solyc01g010520.2.1 | Tomato | nucleus | 73.0 | 74.02 |
| AT2G46420.3 | Thale cress | nucleus | 73.55 | 73.55 |
| AT3G61700.2 | Thale cress | nucleus | 72.18 | 71.98 |
| KXG31543 | Sorghum | nucleus | 67.49 | 67.68 |
| TraesCS3D01G106200.1 | Wheat | nucleus | 66.12 | 67.04 |
| Solyc05g007270.2.1 | Tomato | cytosol | 74.38 | 66.83 |
| GSMUA_Achr7P14110_001 | Banana | nucleus | 66.39 | 66.76 |
| TraesCS3B01G171500.1 | Wheat | nucleus | 65.29 | 66.39 |
| Zm00001d039349_P002 | Maize | nucleus | 66.12 | 66.12 |
| TraesCS3A01G104000.1 | Wheat | unclear | 65.29 | 66.02 |
| GSMUA_Achr10P... | Banana | nucleus | 65.56 | 65.93 |
| TraesCS3B01G122400.1 | Wheat | nucleus | 65.01 | 65.74 |
| TraesCS3A01G144700.2 | Wheat | nucleus | 65.56 | 65.56 |
| TraesCS3D01G153500.1 | Wheat | cytosol | 65.29 | 65.29 |
| GSMUA_Achr6P05700_001 | Banana | nucleus | 61.71 | 63.82 |
| Zm00001d008954_P002 | Maize | nucleus | 66.94 | 61.52 |
| Os05t0212400-01 | Rice | cytosol, nucleus | 59.23 | 60.56 |
| GSMUA_Achr6P14310_001 | Banana | nucleus | 60.06 | 58.92 |
| Os01t0220200-01 | Rice | cytosol, nucleus, plastid | 18.73 | 56.2 |
| TraesCS1A01G126500.1 | Wheat | cytosol, nucleus, plastid | 41.05 | 51.92 |
| KRG92960 | Soybean | nucleus | 10.74 | 39.8 |
| KRH19744 | Soybean | cytosol | 9.37 | 35.42 |
| KRH70528 | Soybean | nucleus | 11.02 | 35.4 |
| KRH01576 | Soybean | cytosol | 9.64 | 35.35 |
| KRH67570 | Soybean | cytosol | 8.82 | 34.41 |
| KRG95854 | Soybean | cytosol | 8.82 | 34.41 |
| KRH66806 | Soybean | nucleus | 31.41 | 34.03 |
| KRG99379 | Soybean | cytosol | 9.37 | 33.33 |
| KRG95131 | Soybean | nucleus | 30.85 | 33.04 |
| KRH45644 | Soybean | cytosol | 9.09 | 32.35 |
| KRH36210 | Soybean | extracellular | 9.37 | 30.63 |
| KRH18789 | Soybean | nucleus | 18.73 | 18.89 |
Protein Annotations
| EMBL:ACUP02009840 | EnsemblPlants:KRH06484 | EnsemblPlantsGene:GLYMA_16G025500 | EntrezGene:100809603 | InterPro:CHP01589_pln | PANTHER:PTHR31871 |
| PANTHER:PTHR31871:SF9 | PFAM:PF09713 | ProteinID:KRH06484 | ProteinID:KRH06484.1 | ProteinID:KRH06485.1 | ProteinID:KRH06486.1 |
| ProteinID:KRH06487.1 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI000233BBE7 | UniProt:I1MKJ8 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr16:-:2454851..2461829
Molecular Weight (calculated)
39233.1 Da
IEP (calculated)
4.450
GRAVY (calculated)
-0.349
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNLQSSEEL QSSTQASHEP KSEQPNNHTT DAPVTDTGSA SATSNDSKKV SRQDIEFVQN LIERCLQLYM NKDEVVKTLL TRAKIDPGFT TLVWQKLEEE
101: NADFFRAYYI RLKLKKQILL FNHLLEHQYH LMKCPMPAKV PLAPIQNGIH PMPANNLPMG YPVLQQPPMP ATGQPHIDSM GCGISSCHVV NGVPAPGNFH
201: PIRMNSGNDM VVDHSAPDMA PVIPPNGTMS SVSEMPVSPT SVASSGHFAF SASEISGMGA DASALDTAFT SDVVSSVGLQ LAPDGGNGIS RSLDQIQWNF
301: SLSDLTADLP NLGDLGALGN YPGSPFLPSD SDILLESPDQ QDIVDDFFVN SEPPCSQSDE EKS
101: NADFFRAYYI RLKLKKQILL FNHLLEHQYH LMKCPMPAKV PLAPIQNGIH PMPANNLPMG YPVLQQPPMP ATGQPHIDSM GCGISSCHVV NGVPAPGNFH
201: PIRMNSGNDM VVDHSAPDMA PVIPPNGTMS SVSEMPVSPT SVASSGHFAF SASEISGMGA DASALDTAFT SDVVSSVGLQ LAPDGGNGIS RSLDQIQWNF
301: SLSDLTADLP NLGDLGALGN YPGSPFLPSD SDILLESPDQ QDIVDDFFVN SEPPCSQSDE EKS
001: MKNGQELQSS TQVSHESQGE QKVNLSVEAP IQDSGSVSAS SNDGRKVSRQ DIELVQNLIE RCLQLYMSRD EVVKTLLTRA RIDPGFTTLV WQKLEEENAE
101: FFRAYYIRLK LKKQIVVFNH LLEHQYHLTK YNVHSKVPLV PMQNGIHPMA SVNNMPMGYP VLQHPQMHAQ GHPHLDPMSC GMSSCHVVNG VPAPANFQPM
201: RINSGNDMVI DTTMAEPTPM IPPNSGMSDM PVSPASVASS GHFPFAASDM SGMGMDTSAL DSAFTSDVGT SVGLQLGSDG GAGNSRDPLR PFDQIPWNFS
301: LSDLTADLSN LGDLGALGNY PGSPFLPSDS EILLDSPEQE DIDEFFVDSI PGPPCSQSEE DKS
101: FFRAYYIRLK LKKQIVVFNH LLEHQYHLTK YNVHSKVPLV PMQNGIHPMA SVNNMPMGYP VLQHPQMHAQ GHPHLDPMSC GMSSCHVVNG VPAPANFQPM
201: RINSGNDMVI DTTMAEPTPM IPPNSGMSDM PVSPASVASS GHFPFAASDM SGMGMDTSAL DSAFTSDVGT SVGLQLGSDG GAGNSRDPLR PFDQIPWNFS
301: LSDLTADLSN LGDLGALGNY PGSPFLPSDS EILLDSPEQE DIDEFFVDSI PGPPCSQSEE DKS
Arabidopsis Description
At2g46420/F11C10.11 [Source:UniProtKB/TrEMBL;Acc:Q9SKD8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.