Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007627.1-P | Field mustard | cytosol | 98.54 | 98.54 |
| CDX71711 | Canola | mitochondrion | 21.82 | 79.96 |
| CDX80017 | Canola | nucleus | 16.9 | 77.44 |
| CDY42046 | Canola | nucleus | 17.14 | 76.63 |
| CDY25057 | Canola | nucleus | 16.35 | 74.1 |
| CDX67857 | Canola | nucleus | 16.35 | 73.5 |
| TraesCS3B01G171500.1 | Wheat | nucleus | 12.89 | 59.38 |
| GSMUA_Achr7P14110_001 | Banana | nucleus | 12.95 | 59.0 |
| TraesCS3A01G144700.2 | Wheat | nucleus | 12.89 | 58.4 |
| Zm00001d039349_P002 | Maize | nucleus | 12.83 | 58.13 |
| TraesCS3D01G106200.1 | Wheat | nucleus | 12.58 | 57.82 |
| KXG31543 | Sorghum | nucleus | 12.71 | 57.73 |
| TraesCS3D01G153500.1 | Wheat | cytosol | 12.71 | 57.58 |
| TraesCS3A01G104000.1 | Wheat | unclear | 12.52 | 57.38 |
| TraesCS3B01G122400.1 | Wheat | nucleus | 12.46 | 57.1 |
| GSMUA_Achr10P... | Banana | nucleus | 12.46 | 56.79 |
| GSMUA_Achr6P05700_001 | Banana | nucleus | 11.85 | 55.56 |
| GSMUA_Achr6P14310_001 | Banana | nucleus | 11.73 | 52.16 |
| Zm00001d008954_P002 | Maize | nucleus | 12.46 | 51.9 |
| Os05t0212400-01 | Rice | cytosol, nucleus | 11.06 | 51.27 |
| Os01t0220200-01 | Rice | cytosol, nucleus, plastid | 3.47 | 47.11 |
| TraesCS1A01G126500.1 | Wheat | cytosol, nucleus, plastid | 7.84 | 44.95 |
| CDY53585 | Canola | cytosol | 1.28 | 39.62 |
| CDY20432 | Canola | cytosol | 1.76 | 36.71 |
| CDX73396 | Canola | nucleus | 2.07 | 35.79 |
| CDX76114 | Canola | nucleus | 2.07 | 35.79 |
| CDY40206 | Canola | nucleus | 2.07 | 35.79 |
| CDY02930 | Canola | nucleus | 2.07 | 35.79 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 1.95 | 35.16 |
| CDY11219 | Canola | cytosol | 1.95 | 35.16 |
| CDY56714 | Canola | mitochondrion, nucleus | 6.93 | 34.76 |
| CDY41330 | Canola | mitochondrion, nucleus | 6.87 | 34.56 |
| CDY72004 | Canola | extracellular | 1.16 | 33.33 |
| CDY08617 | Canola | mitochondrion, nucleus | 6.63 | 33.13 |
| CDY00915 | Canola | mitochondrion, nucleus | 6.63 | 32.83 |
| CDX93395 | Canola | cytosol | 1.88 | 30.69 |
| CDY37956 | Canola | cytosol | 1.88 | 30.69 |
Protein Annotations
| Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | MapMan:35.2 | GO:A0A078FDH3 | UniProt:A0A078FDH3 | EnsemblPlants:CDY11376 |
| ProteinID:CDY11376 | ProteinID:CDY11376.1 | InterPro:CHP01589_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016779 | EnsemblPlantsGene:GSBRNA2T00049431001 | PFAM:PF01909 | PFAM:PF09713 | PANTHER:PTHR23092 | PANTHER:PTHR23092:SF33 |
| InterPro:Polymerase_NTP_transf_dom | SUPFAM:SSF81301 | SUPFAM:SSF81631 | TIGRFAMs:TIGR01589 | UniParc:UPI0004EE9B4A | SEG:seg |
Description
BnaA09g39420DBnaA09g39420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDH3]
Coordinates
chrLK032011:+:81130..91407
Molecular Weight (calculated)
182476.0 Da
IEP (calculated)
6.470
GRAVY (calculated)
-0.649
Length
1645 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGENGSSAPN GLFPNGLLPG KAASVTRPLD AERWAKAEDR TAKLIACIQP NPPSEDRRNA VARYVRRLIM ECFPLQVEIF TFGSVPLKTY LPDGDIDLTA
0101: FSTNQSLKDS WANLVRDMLE KEERNENAEF RVKEVQYIQA EVKLIKCLVE NIVVDISFNQ IGGLCTLCFL EEADLFINQN HLFKRSIILI KAWCYYESRI
0201: LGAHHGLIST YALETLVLYI FHVFDNSFSG PLEVLYRFLE FFSKFDWQNF CISLWGPVPV SSLPDVTAEP PRKDVGELRK SEAFLKEFSR AYAVNPVAQE
0301: TQGHPFVAKH FNVIDPLREN NNLGRSVSKG NFFRIRSAFT LGAKKLARLL ECPKENLIHE VNQFFMNTWE RHGSGRRPDA PGNDLWLSRL GDPEPCLQAD
0401: NVSNSSSSNR NQNSAPRSVP SRQNNGGTEV ISKATYHAQK NSGNSYQLAQ EVRSNQNASN GKLQQTVKPE IMANNFHGRH LFARTRSSPE LTETYGEALL
0501: PSRRSRAPEA GKRQTNSTRV DSIREKGLES ESLSSSIRNE ADSSSVRHTP SPRSPDSTVD MSSAVNSYCD DLGSVSVNEG FSAAGEYGMQ QEEQDLVNSM
0601: AYVAGQGFNG HFPFPFNFST GPHLPFPVTP AILASMGYGQ RNVPGIIPSN LPFMETPWSA NMQFPQNFVS PPFPHYFPSG SHPMSEKLSK AGNEEMGSPE
0701: VNVEESDHDH WYEQERGTPS FRLENGMQQA NDKHHSSSAE HSFVPSSRKI RSTRGDDLEN SHSPVRGSQI QNEERNAGSR SVSCASSVRS RTSSESSWDG
0801: STTKGSKPAR DKRNRKAVSG AASALYGKGK SVPGHSVQVE GDNREWIPVS SKEITERDLG PCPTVASFQL QRNHVHGHEL AKTSGSESTV SLAPFILGHG
0901: MQRKEAYGSG YTFVPTGPPV PLFAMLPMHN YQAGGNATSD TLASHLSVDE VVENHDPCKS FDSFRGLDLS EINVSSHSTG VGSYVEPREH KNDILNGDIM
1001: SHWQSLQYGR SCQSFQHPPV LYPPSVLVPP AYLQGRLPWD GPGRSLAYTN AVNQLMMTYG PRLVPVAPVS TRPPNIYPRY ANETPRYRSG TGTYFPNPIS
1101: PREQRPASGM RRGNYGHDRN DHQSDREDNW NAGTKARGSG RSSHNNRNQV DNKPRQDRSD RQWGSSYRHE SSSYSSHHSQ NGSIRSNNSQ DAPGNVVYSV
1201: YRLPPGMTQN SVTSPEGQHN PPSAMMFYPY DHNSVDEAPH LNDGNHSAGG GGAFEDQPRY RGTHMSSPDD PSSPRFPRQE FWLNDACTLY SPVMKNGQEL
1301: VQSSTQASHE YQDEHKINQS VDAPPIQDAV SVSATCNDSR KVSRQDIELV QNLIERCLQL YMNRDEVMKT LLDRARIEPG FTSLVWQKLE EENADFFRAY
1401: YIRLKLKKQI IMFNHLLEHQ YHLMKYSPTP VPQKFPLAPM PNGMHHMAPV VTMPMGYPVL QHPQMHVPGH PHIDAMGVSS YHVVNGVPAN FQPRKMNSTN
1501: DMVIDTTLDD ATPQVIPPNS GGMSVSPASV ASSGHFPFDA SDMVMDASVL DSAFTSEVGG GEGGAGNARD SLRSFDQIPW NFSLSDLTAD LSNLGELGGL
1601: GNYPGSPFLP SDSEILLDSP DHEDIEEFFV DVPGPPCSNS DEEKP
0101: FSTNQSLKDS WANLVRDMLE KEERNENAEF RVKEVQYIQA EVKLIKCLVE NIVVDISFNQ IGGLCTLCFL EEADLFINQN HLFKRSIILI KAWCYYESRI
0201: LGAHHGLIST YALETLVLYI FHVFDNSFSG PLEVLYRFLE FFSKFDWQNF CISLWGPVPV SSLPDVTAEP PRKDVGELRK SEAFLKEFSR AYAVNPVAQE
0301: TQGHPFVAKH FNVIDPLREN NNLGRSVSKG NFFRIRSAFT LGAKKLARLL ECPKENLIHE VNQFFMNTWE RHGSGRRPDA PGNDLWLSRL GDPEPCLQAD
0401: NVSNSSSSNR NQNSAPRSVP SRQNNGGTEV ISKATYHAQK NSGNSYQLAQ EVRSNQNASN GKLQQTVKPE IMANNFHGRH LFARTRSSPE LTETYGEALL
0501: PSRRSRAPEA GKRQTNSTRV DSIREKGLES ESLSSSIRNE ADSSSVRHTP SPRSPDSTVD MSSAVNSYCD DLGSVSVNEG FSAAGEYGMQ QEEQDLVNSM
0601: AYVAGQGFNG HFPFPFNFST GPHLPFPVTP AILASMGYGQ RNVPGIIPSN LPFMETPWSA NMQFPQNFVS PPFPHYFPSG SHPMSEKLSK AGNEEMGSPE
0701: VNVEESDHDH WYEQERGTPS FRLENGMQQA NDKHHSSSAE HSFVPSSRKI RSTRGDDLEN SHSPVRGSQI QNEERNAGSR SVSCASSVRS RTSSESSWDG
0801: STTKGSKPAR DKRNRKAVSG AASALYGKGK SVPGHSVQVE GDNREWIPVS SKEITERDLG PCPTVASFQL QRNHVHGHEL AKTSGSESTV SLAPFILGHG
0901: MQRKEAYGSG YTFVPTGPPV PLFAMLPMHN YQAGGNATSD TLASHLSVDE VVENHDPCKS FDSFRGLDLS EINVSSHSTG VGSYVEPREH KNDILNGDIM
1001: SHWQSLQYGR SCQSFQHPPV LYPPSVLVPP AYLQGRLPWD GPGRSLAYTN AVNQLMMTYG PRLVPVAPVS TRPPNIYPRY ANETPRYRSG TGTYFPNPIS
1101: PREQRPASGM RRGNYGHDRN DHQSDREDNW NAGTKARGSG RSSHNNRNQV DNKPRQDRSD RQWGSSYRHE SSSYSSHHSQ NGSIRSNNSQ DAPGNVVYSV
1201: YRLPPGMTQN SVTSPEGQHN PPSAMMFYPY DHNSVDEAPH LNDGNHSAGG GGAFEDQPRY RGTHMSSPDD PSSPRFPRQE FWLNDACTLY SPVMKNGQEL
1301: VQSSTQASHE YQDEHKINQS VDAPPIQDAV SVSATCNDSR KVSRQDIELV QNLIERCLQL YMNRDEVMKT LLDRARIEPG FTSLVWQKLE EENADFFRAY
1401: YIRLKLKKQI IMFNHLLEHQ YHLMKYSPTP VPQKFPLAPM PNGMHHMAPV VTMPMGYPVL QHPQMHVPGH PHIDAMGVSS YHVVNGVPAN FQPRKMNSTN
1501: DMVIDTTLDD ATPQVIPPNS GGMSVSPASV ASSGHFPFDA SDMVMDASVL DSAFTSEVGG GEGGAGNARD SLRSFDQIPW NFSLSDLTAD LSNLGELGGL
1601: GNYPGSPFLP SDSEILLDSP DHEDIEEFFV DVPGPPCSNS DEEKP
0001: MGEHESWAAS PPSPSGLHPN GLLPGKAASV TRPLDAERWA KAEDRTAKLI ACIQPNPPSE DRRNAVASYV RRLIMECFPQ VQIFMFGSVP LKTYLPDGDI
0101: DLTAFSANQN LKDSWANLVR DMLEKEEKNE NAEFHVKEVQ YIQAEVKIIK CLVENIVVDI SFNQIGGLCT LCFLEEVDHY INQNHLFKRS IILIKAWCYY
0201: ESRILGAHHG LISTYALETL VLYIFYLFNN SFSGPLEVLY RFLEFFSKFD WQNFCLSLWG PVPVSSLPDV TAEPPRRDVG ELRVSEAFYR ACSRVYAVNI
0301: APQEIQGQPF VSKHFNVIDP LRENNNLGRS VSKGNFFRIR SAFTLGAKKL TRLLECPKEN LIHEVNQFFM NTWERHGSGR RPDAPGNDLW LSRLGDPEPY
0401: HQAENVSNSL NNKRNQNAIR LGGVHGARSM PSQQNNCGTE ITSRVTYQTQ KSRGNSYQPA QEVNSNQSAL NDKLQQTVKP ETLVNNFHGR HIFARTRSSP
0501: ELTETHGEAL LQSRRSRAAP DAGKRQTNST RVDSIRKKSL ESETLSSGVR YSADSSSVRH TPSPQSPDST ADMSSAVNSY YDEVGSVSVN EDFSVAGEQE
0601: EQDLVNSMTS VTGQGFNGHF PFPFNFSTGH LPFPITPSIL ASMGYGQRNM PGIVPSNLPF IEAPWSTNLQ FPQNFVSSPF THYFPSGAHP ISEKPSKTGS
0701: DDMGSSEVNV DESDNDLWHE PERGTHSFGL ENGGYGMHQA DDKHQSSFAE HSFVPSRRKN RLTRGDDLEN SHSPVRGSSQ IQSEERTVGS RSVSGASSVR
0801: SRTSSESSWD GSTTRGSKPA KDRRNRKVVS GAASTLYGKG KSVPEHSIQI DDDNREWIPV SSNEIIDRDL GPRPTVPSFQ VQRHQIHGHE LAQASGSEST
0901: VSLAPFILGH GMQQNEVDNS GYTFYPTGPP VPIVAMLPMY NYQAGGNATS DALASHHSVD EGVENHEPCK SFDSSRGLDQ SEIVVSSHST RMGSSAEQVE
1001: RKNDILNGDF ISHWQNLQYG RSCQNSQHPP VLYPAPVVVP PAYLQGRLPW DGPGRPLAYT NAVNQLMTYG PRLVPVAPVQ PVSTRPPNIY PRYANETPRY
1101: RSGTGTYFPN PKISPREQRP TSGMRRGNYG HDRTDHHSDR EGNWNAGSKT RGSGRNHNNR NQADNKPISR QDRSDRHWGS SYRHESSSYS AHHSQNGPIR
1201: SNTSQDASGN IAYGMYRLPP GMKQNSVTSS EGHNVPSVMM FYPYGHNNVY NSPSEHNEYG SLGPGGEAPH LNDEDQPRFR GAAASAHMSS PDDPSSPHFP
1301: RGK
0101: DLTAFSANQN LKDSWANLVR DMLEKEEKNE NAEFHVKEVQ YIQAEVKIIK CLVENIVVDI SFNQIGGLCT LCFLEEVDHY INQNHLFKRS IILIKAWCYY
0201: ESRILGAHHG LISTYALETL VLYIFYLFNN SFSGPLEVLY RFLEFFSKFD WQNFCLSLWG PVPVSSLPDV TAEPPRRDVG ELRVSEAFYR ACSRVYAVNI
0301: APQEIQGQPF VSKHFNVIDP LRENNNLGRS VSKGNFFRIR SAFTLGAKKL TRLLECPKEN LIHEVNQFFM NTWERHGSGR RPDAPGNDLW LSRLGDPEPY
0401: HQAENVSNSL NNKRNQNAIR LGGVHGARSM PSQQNNCGTE ITSRVTYQTQ KSRGNSYQPA QEVNSNQSAL NDKLQQTVKP ETLVNNFHGR HIFARTRSSP
0501: ELTETHGEAL LQSRRSRAAP DAGKRQTNST RVDSIRKKSL ESETLSSGVR YSADSSSVRH TPSPQSPDST ADMSSAVNSY YDEVGSVSVN EDFSVAGEQE
0601: EQDLVNSMTS VTGQGFNGHF PFPFNFSTGH LPFPITPSIL ASMGYGQRNM PGIVPSNLPF IEAPWSTNLQ FPQNFVSSPF THYFPSGAHP ISEKPSKTGS
0701: DDMGSSEVNV DESDNDLWHE PERGTHSFGL ENGGYGMHQA DDKHQSSFAE HSFVPSRRKN RLTRGDDLEN SHSPVRGSSQ IQSEERTVGS RSVSGASSVR
0801: SRTSSESSWD GSTTRGSKPA KDRRNRKVVS GAASTLYGKG KSVPEHSIQI DDDNREWIPV SSNEIIDRDL GPRPTVPSFQ VQRHQIHGHE LAQASGSEST
0901: VSLAPFILGH GMQQNEVDNS GYTFYPTGPP VPIVAMLPMY NYQAGGNATS DALASHHSVD EGVENHEPCK SFDSSRGLDQ SEIVVSSHST RMGSSAEQVE
1001: RKNDILNGDF ISHWQNLQYG RSCQNSQHPP VLYPAPVVVP PAYLQGRLPW DGPGRPLAYT NAVNQLMTYG PRLVPVAPVQ PVSTRPPNIY PRYANETPRY
1101: RSGTGTYFPN PKISPREQRP TSGMRRGNYG HDRTDHHSDR EGNWNAGSKT RGSGRNHNNR NQADNKPISR QDRSDRHWGS SYRHESSSYS AHHSQNGPIR
1201: SNTSQDASGN IAYGMYRLPP GMKQNSVTSS EGHNVPSVMM FYPYGHNNVY NSPSEHNEYG SLGPGGEAPH LNDEDQPRFR GAAASAHMSS PDDPSSPHFP
1301: RGK
Arabidopsis Description
Nucleotidyltransferase [Source:UniProtKB/TrEMBL;Acc:F4JFF2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.