Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028675_P001 | Maize | cytosol, nucleus, plastid | 56.41 | 55.0 |
| EER95072 | Sorghum | cytosol, nucleus, plastid | 55.13 | 54.43 |
| Os03t0280400-01 | Rice | cytosol, nucleus, plastid | 53.85 | 53.85 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 53.85 | 53.16 |
| Zm00001d047779_P001 | Maize | nucleus | 55.13 | 53.09 |
| KRH67570 | Soybean | cytosol | 58.97 | 49.46 |
| KRG95854 | Soybean | cytosol | 58.97 | 49.46 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 35.9 | 48.28 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 58.97 | 47.92 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 58.97 | 47.42 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 50.0 | 44.83 |
| KRH19744 | Soybean | cytosol | 55.13 | 44.79 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 55.13 | 44.33 |
| Bra005731.1-P | Field mustard | cytosol | 51.28 | 43.96 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 51.28 | 43.96 |
| CDY11219 | Canola | cytosol | 51.28 | 43.96 |
| AT5G02580.1 | Thale cress | cytosol | 51.28 | 43.96 |
| CDY72004 | Canola | extracellular | 32.05 | 43.86 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 52.56 | 43.62 |
| GSMUA_Achr10P... | Banana | cytosol | 51.28 | 43.01 |
| PGSC0003DMT400061428 | Potato | nucleus | 52.56 | 40.2 |
| Solyc09g005730.2.1 | Tomato | nucleus | 52.56 | 39.81 |
| Solyc10g084600.1.1 | Tomato | nucleus | 53.85 | 38.53 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 55.13 | 34.68 |
| TraesCS4B01G202900.2 | Wheat | cytosol | 42.31 | 34.02 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 53.85 | 29.37 |
| TraesCS4D01G203800.1 | Wheat | mitochondrion | 55.13 | 27.39 |
| GSMUA_Achr10P... | Banana | nucleus | 38.46 | 9.35 |
| GSMUA_Achr1P08340_001 | Banana | cytosol | 35.9 | 8.75 |
| GSMUA_Achr6P05700_001 | Banana | nucleus | 38.46 | 8.55 |
| GSMUA_Achr10P... | Banana | nucleus | 38.46 | 8.31 |
| GSMUA_Achr7P14110_001 | Banana | nucleus | 38.46 | 8.31 |
| GSMUA_Achr11P... | Banana | nucleus | 34.62 | 8.31 |
| GSMUA_Achr6P14310_001 | Banana | nucleus | 38.46 | 8.11 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P15290_001 | EnsemblPlants:GSMUA_Achr7T15290_001 | EnsemblPlantsGene:GSMUA_Achr7G15290_001 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PFAM:PF09713 |
| TIGRFAMs:TIGR01589 | UniParc:UPI000296AAD3 | UniProt:M0THR6 | MapMan:35.2 | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G15290_001]
Coordinates
chr7:+:12245784..12246364
Molecular Weight (calculated)
9194.1 Da
IEP (calculated)
6.504
GRAVY (calculated)
-0.317
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MGEHYSPAAA YIRLVQHLIE TCLLWHMSME ECMEALLLHA DVSPAITSTV WKELEKENQE FFRAYRRVPP QYVGQSRR
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.