Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93395 | Canola | cytosol | 95.56 | 85.15 |
| CDY37956 | Canola | cytosol | 95.56 | 85.15 |
| AT1G10657.1 | Thale cress | cytosol | 88.89 | 64.0 |
| VIT_01s0127g00340.t01 | Wine grape | cytosol | 57.78 | 52.53 |
| KRG99379 | Soybean | cytosol | 55.56 | 49.02 |
| KRH45644 | Soybean | cytosol | 54.44 | 48.04 |
| PGSC0003DMT400035154 | Potato | cytosol | 54.44 | 48.04 |
| Solyc05g005230.2.1 | Tomato | cytosol | 53.33 | 46.6 |
| Bra005731.1-P | Field mustard | cytosol | 36.67 | 36.26 |
| Bra007149.1-P | Field mustard | nucleus | 37.78 | 35.79 |
| Bra014767.1-P | Field mustard | nucleus | 37.78 | 35.79 |
| Bra004538.1-P | Field mustard | nucleus | 35.56 | 8.91 |
| Bra034101.1-P | Field mustard | mitochondrion, nucleus | 30.0 | 8.31 |
| Bra029826.1-P | Field mustard | mitochondrion, nucleus | 30.0 | 8.21 |
| Bra003465.1-P | Field mustard | nucleus | 33.33 | 8.2 |
| Bra007627.1-P | Field mustard | cytosol | 35.56 | 1.95 |
Protein Annotations
| EnsemblPlants:Bra019909.1 | EnsemblPlants:Bra019909.1-P | EnsemblPlantsGene:Bra019909 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PFAM:PF09713 |
| TIGRFAMs:TIGR01589 | UniParc:UPI000253EA91 | UniProt:M4DTR6 | MapMan:35.2 | : | : |
Description
AT1G10657 (E=9e-047) | unknown protein
Coordinates
chrA06:+:3766321..3766980
Molecular Weight (calculated)
10715.0 Da
IEP (calculated)
7.941
GRAVY (calculated)
-0.432
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MCTHHDDQSQ QNLPCLHCQP HTYIRMVQHM IERCIILRMT RDECVKALDH HASILPLVTL TVWRGLQREN KDFFETYGHF VSPRPFLSKN
1: MCTHADESQH NNLPCLHCQP HSYIRMVQHM IERCILLRMT RDECVKALDH HASILPLVTL TVWRGLQREN KDFFETYGHF VSPRPFLSKR LWDQMSSSNC
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q0WR17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.