Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g005230.2.1 | Tomato | cytosol | 94.12 | 93.2 |
| VIT_01s0127g00340.t01 | Wine grape | cytosol | 62.75 | 64.65 |
| Bra019909.1-P | Field mustard | cytosol | 48.04 | 54.44 |
| CDX93395 | Canola | cytosol | 52.94 | 53.47 |
| CDY37956 | Canola | cytosol | 52.94 | 53.47 |
| KRH45644 | Soybean | cytosol | 50.98 | 50.98 |
| KRG99379 | Soybean | cytosol | 49.02 | 49.02 |
| AT1G10657.1 | Thale cress | cytosol | 53.92 | 44.0 |
| PGSC0003DMT400060454 | Potato | cytosol | 32.35 | 31.73 |
| PGSC0003DMT400061428 | Potato | nucleus | 30.39 | 30.39 |
| PGSC0003DMT400081823 | Potato | nucleus | 30.39 | 9.75 |
| PGSC0003DMT400024865 | Potato | nucleus | 34.31 | 9.49 |
| PGSC0003DMT400076729 | Potato | nucleus | 28.43 | 9.29 |
| PGSC0003DMT400076756 | Potato | nucleus | 28.43 | 9.29 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400035154 | EnsemblPlantsGene:PGSC0003DMG400013512 | EntrezGene:102588171 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF5 |
| PFAM:PF09713 | PGSC:PGSC0003DMG400013512 | RefSeq:XP_006356430.1 | TIGRFAMs:TIGR01589 | UniParc:UPI00029490C0 | UniProt:M1B1W3 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400013512]
Coordinates
chr5:-:8829623..8831150
Molecular Weight (calculated)
12506.2 Da
IEP (calculated)
8.998
GRAVY (calculated)
-0.492
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHQNQEYYH FPCLCCNPHT YIRMVQNMIE RCLVLGMDRD ECIKTLAIHA RIRPLVTLTV WRELIKENKD FFQAYFTNIS TQVPSLSFQR EPRFGRRKQY
101: WQ
101: WQ
001: MCTHADESQH NNLPCLHCQP HSYIRMVQHM IERCILLRMT RDECVKALDH HASILPLVTL TVWRGLQREN KDFFETYGHF VSPRPFLSGY VRRSPRFAKR
101: I
101: I
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q0WR17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.