Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92829 | Soybean | nucleus | 81.25 | 69.44 |
| VIT_14s0128g00280.t01 | Wine grape | nucleus, plastid | 28.5 | 45.78 |
| PGSC0003DMT400073580 | Potato | cytosol, nucleus, plasma membrane | 43.75 | 35.79 |
| Solyc01g098790.1.1 | Tomato | cytosol, nucleus, plasma membrane | 43.25 | 35.52 |
| KRH44015 | Soybean | nucleus | 31.0 | 31.47 |
| KRH10443 | Soybean | nucleus | 30.5 | 30.96 |
Protein Annotations
| EMBL:ACUP02006566 | EnsemblPlants:KRH33964 | EnsemblPlantsGene:GLYMA_10G155800 | EntrezGene:100775950 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR34661 | PANTHER:PTHR34661:SF3 | PFscan:PS01031 |
| ProteinID:KRH33964 | ProteinID:KRH33964.1 | SEG:seg | SUPFAM:SSF49764 | UniParc:UPI000296445D | UniProt:I1LBD7 |
| MapMan:12.5.3.2.3 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:39020803..39023442
Molecular Weight (calculated)
44073.9 Da
IEP (calculated)
4.719
GRAVY (calculated)
-0.411
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVSEADLEN DDRCFLLYFI MGTYFGPDIK GETTKKSILQ RVAEGLPPYT LDQLTHSCIK IVELERVYYY ILRNTEKSLI LKLTSLRRFF QGQALGGDGN
101: GNGNNNNYPQ FPELFHPGFH PQYRFKNKHK VVDNVVFINN PDSFYIRIED VERFKRLSGV EELHVDRDAA RLQLGICFDD NRVPSNTDIS VGNVEPDGNV
201: ESCGGGGGGS SEPEDRVNVD ASRSGGATCR GGTNVMYDYM DTEDDESDHD KVGPAMLFLP SRPSKKEWSD IVAATKNGFG LTGTVATGGI GPTMGLVDIG
301: ECEDAYLFRL SLPGVKRNER EFSCEVGTDG KVLISGVTTT GENTVSRYSQ VFEMQTRNLC PPGQFSVSFQ LPGPVDPHQF SGNFGIDGIL EGVVMKGKCT
101: GNGNNNNYPQ FPELFHPGFH PQYRFKNKHK VVDNVVFINN PDSFYIRIED VERFKRLSGV EELHVDRDAA RLQLGICFDD NRVPSNTDIS VGNVEPDGNV
201: ESCGGGGGGS SEPEDRVNVD ASRSGGATCR GGTNVMYDYM DTEDDESDHD KVGPAMLFLP SRPSKKEWSD IVAATKNGFG LTGTVATGGI GPTMGLVDIG
301: ECEDAYLFRL SLPGVKRNER EFSCEVGTDG KVLISGVTTT GENTVSRYSQ VFEMQTRNLC PPGQFSVSFQ LPGPVDPHQF SGNFGIDGIL EGVVMKGKCT
001: MSDTMPEIVS PLVAENSQEQ EESVLISLDI EEDKLFLLHF IIGTYFGPDL RKQHHRPKQS AFQIQALKNV VVDELSGSLM KRAELERVYY HIIRNVDPSL
101: VMKPKKLREY FNAKRNDSNR DYPLFVDLFP RKLHPETHVR HKFKFIRSIV FINDPDTSCM REECVARFKR LTGLDSFALS LSVDVTKSNG VVAANEVKVE
201: IDESVEPVKE DNAGTCTSGE ESDVAAKPEV KSEAHGGLMV GLMDIGECDD AYLFRVSLPG VKRDERYFSC EVEDNGKVLV RGVTTTGGKR VKRYSHVFEM
301: QTRSLCPPGN FSVSFRLPGP VHPHEFSGNF GTDGILEGVV MKNLQKQTV
101: VMKPKKLREY FNAKRNDSNR DYPLFVDLFP RKLHPETHVR HKFKFIRSIV FINDPDTSCM REECVARFKR LTGLDSFALS LSVDVTKSNG VVAANEVKVE
201: IDESVEPVKE DNAGTCTSGE ESDVAAKPEV KSEAHGGLMV GLMDIGECDD AYLFRVSLPG VKRDERYFSC EVEDNGKVLV RGVTTTGGKR VKRYSHVFEM
301: QTRSLCPPGN FSVSFRLPGP VHPHEFSGNF GTDGILEGVV MKNLQKQTV
Arabidopsis Description
IDM2Increased DNA methylation 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.