Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g098790.1.1 | Tomato | cytosol, nucleus, plasma membrane | 87.73 | 88.09 |
| VIT_14s0128g00280.t01 | Wine grape | nucleus, plastid | 23.31 | 45.78 |
| KRH33964 | Soybean | cytosol | 35.79 | 43.75 |
| PGSC0003DMT400025891 | Potato | cytosol | 16.36 | 40.61 |
| KRG92829 | Soybean | nucleus | 38.04 | 39.74 |
| PGSC0003DMT400025889 | Potato | cytosol | 11.45 | 36.6 |
| PGSC0003DMT400073582 | Potato | cytosol | 15.75 | 33.33 |
| PGSC0003DMT400025890 | Potato | cytosol | 7.77 | 27.74 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400073580 | EnsemblPlantsGene:PGSC0003DMG400028582 | EntrezGene:102584031 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR34661 | PANTHER:PTHR34661:SF3 | PFscan:PS01031 | PGSC:PGSC0003DMG400028582 |
| RefSeq:XP_006361863.1 | UniParc:UPI0002950E19 | UniProt:M1CSA1 | MapMan:12.5.3.2.3 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400028582]
Coordinates
chr1:+:76452924..76454627
Molecular Weight (calculated)
54042.6 Da
IEP (calculated)
4.540
GRAVY (calculated)
-0.337
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNNFTGLVP TDDQFFLLYF IIGTYFGPDL LVEYPKRSVL QRKGLGLPPY SSNQLAGSCL RTIEVERVYY HALRKADRSV VLAQPWLHQY FHGKLPTLYR
101: KQPAAYPRFC DLFPPSLHPH LCCDVYNVIA NIVFINDPDT SYIEPDSVKR FKKLTGLEHL VMDKDCTKSQ ADVDYEALSN VRKTEMSNPD DILQYASLAA
201: STSSLPYKET PSCTEPFNDL PLDNEQFDYM SFTSLLKDAS DEPFNGVPPD SNGQSDTRPF SSLLKNACDG SFSNMPPHPN GQFETTLCRS LLKNDGVGQF
301: DDAPPDSSTK SDGTPFSSLF KDVSPLAEES MGPSSKHTNS EDLELSIVFL PSRPSEEELS NIVAATKSGF AVAGSAAKGK IGPVLGLLDV GESEDAYLFR
401: VSLPGVKRDE REFICEVEID GKVLIKGMTT GDRTVHKYSQ VFEMQTQNLC PTGDFTISFK LPGPVDPQEF SGIFGTDGIL EGIVLKAET
101: KQPAAYPRFC DLFPPSLHPH LCCDVYNVIA NIVFINDPDT SYIEPDSVKR FKKLTGLEHL VMDKDCTKSQ ADVDYEALSN VRKTEMSNPD DILQYASLAA
201: STSSLPYKET PSCTEPFNDL PLDNEQFDYM SFTSLLKDAS DEPFNGVPPD SNGQSDTRPF SSLLKNACDG SFSNMPPHPN GQFETTLCRS LLKNDGVGQF
301: DDAPPDSSTK SDGTPFSSLF KDVSPLAEES MGPSSKHTNS EDLELSIVFL PSRPSEEELS NIVAATKSGF AVAGSAAKGK IGPVLGLLDV GESEDAYLFR
401: VSLPGVKRDE REFICEVEID GKVLIKGMTT GDRTVHKYSQ VFEMQTQNLC PTGDFTISFK LPGPVDPQEF SGIFGTDGIL EGIVLKAET
001: MRSSSGLNGM RENNSFPDNT RNPQILEVTP LNSMPYIGPV THASMSSNRM NDSVEKVGGP AMIFLPSDSS SEFSNLISQT KTGVALTGSA AMGKIGLTIG
101: LVDIAESEDS YYFRVALPGV SRDEKEFSCE IEPDGKIMIK GATTTGEQTV CKHNQIFKML TQNLCPPGHF TINFQLPGPV SNEEFNGNFG SDGVLEGVVK
201: KVYYED
101: LVDIAESEDS YYFRVALPGV SRDEKEFSCE IEPDGKIMIK GATTTGEQTV CKHNQIFKML TQNLCPPGHF TINFQLPGPV SNEEFNGNFG SDGVLEGVVK
201: KVYYED
Arabidopsis Description
ACD22.3Alpha-crystallin domain-containing protein 22.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84K79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.