Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g098810.2.1 | Tomato | cytosol, nucleus | 90.48 | 90.87 |
| VIT_14s0128g00260.t01 | Wine grape | cytosol | 38.96 | 53.89 |
| Bra021325.1-P | Field mustard | cytosol | 40.26 | 48.44 |
| CDY17558 | Canola | cytosol | 40.26 | 48.44 |
| AT1G54850.1 | Thale cress | cytosol | 40.26 | 45.15 |
| CDY43486 | Canola | nucleus | 40.26 | 38.11 |
| VIT_14s0128g00270.t01 | Wine grape | cytosol | 35.93 | 33.07 |
| PGSC0003DMT400025890 | Potato | cytosol | 18.61 | 31.39 |
| PGSC0003DMT400025891 | Potato | cytosol | 26.41 | 30.96 |
| PGSC0003DMT400025889 | Potato | cytosol | 19.91 | 30.07 |
| PGSC0003DMT400073580 | Potato | cytosol, nucleus, plasma membrane | 33.33 | 15.75 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400073582 | EnsemblPlantsGene:PGSC0003DMG400028583 | EntrezGene:102583357 | Gene3D:2.60.40.790 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | InterPro:HSP20-like_chaperone | InterPro:IPR008978 | PANTHER:PTHR34661 |
| PANTHER:PTHR34661:SF3 | PGSC:PGSC0003DMG400028583 | RefSeq:XP_006361861.1 | SUPFAM:SSF49764 | UniParc:UPI000296F4D0 | UniProt:M1CSA2 |
| MapMan:35.1 | : | : | : | : | : |
Description
Heat shock protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028583]
Coordinates
chr1:+:76462373..76466156
Molecular Weight (calculated)
24704.1 Da
IEP (calculated)
5.023
GRAVY (calculated)
-0.268
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPWRASQT SLPNHGENNG STPLHPEPLN VAPISCVPYT GPPLPYSYHT SASPDINTGS VPVEADSKHI SSQQHAGGQP AMIFFTACPA REEWDNLINY
101: ANGGVALTGS ALLGKVGPLI GSVDIAESED DYVFRVSLPG VARDERVFRC DVGPNGAIVI KGVSETGENM VRRDNMVFKM QTQNLCPPGE FSVSFQLPGP
201: IDHQNLNCVF GSDGIFEGVV KKRTTGPLRG I
101: ANGGVALTGS ALLGKVGPLI GSVDIAESED DYVFRVSLPG VARDERVFRC DVGPNGAIVI KGVSETGENM VRRDNMVFKM QTQNLCPPGE FSVSFQLPGP
201: IDHQNLNCVF GSDGIFEGVV KKRTTGPLRG I
001: MRSSSGLNGM RENNSFPDNT RNPQILEVTP LNSMPYIGPV THASMSSNRM NDSVEKVGGP AMIFLPSDSS SEFSNLISQT KTGVALTGSA AMGKIGLTIG
101: LVDIAESEDS YYFRVALPGV SRDEKEFSCE IEPDGKIMIK GATTTGEQTV CKHNQIFKML TQNLCPPGHF TINFQLPGPV SNEEFNGNFG SDGVLEGVVK
201: KVYYED
101: LVDIAESEDS YYFRVALPGV SRDEKEFSCE IEPDGKIMIK GATTTGEQTV CKHNQIFKML TQNLCPPGHF TINFQLPGPV SNEEFNGNFG SDGVLEGVVK
201: KVYYED
Arabidopsis Description
ACD22.3Alpha-crystallin domain-containing protein 22.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84K79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.