Factsheet for AT1G54850.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17558	Canola	cytosol	72.33	77.6
Bra021325.1-P	Field mustard	cytosol	71.84	77.08
CDY43486	Canola	nucleus	72.82	61.48
VIT_14s0128g00260.t01	Wine grape	cytosol	45.63	56.29
PGSC0003DMT400073582	Potato	cytosol	45.15	40.26
Solyc01g098810.2.1	Tomato	cytosol, nucleus	44.66	40.0
AT1G76440.1	Thale cress	cytosol	25.24	36.36
VIT_14s0128g00270.t01	Wine grape	cytosol	41.26	33.86
AT1G54840.1	Thale cress	cytosol	33.01	19.48
AT1G20870.1	Thale cress	cytosol	31.55	14.04

Protein Annotations

Gene3D:2.60.40.790	MapMan:35.1	EntrezGene:841924	InterPro:A-crystallin/Hsp20_dom	UniProt:A0A178W9U0	ProteinID:AAC64894.1
ProteinID:AAG51117.1	ProteinID:AEE33156.1	ArrayExpress:AT1G54850	EnsemblPlantsGene:AT1G54850	RefSeq:AT1G54850	TAIR:AT1G54850
RefSeq:AT1G54850-TAIR-G	EnsemblPlants:AT1G54850.1	TAIR:AT1G54850.1	Unigene:At.37161	EMBL:BT002968	EMBL:BT004411
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0008150
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	RefSeq:NP_175882.2	ProteinID:OAP15210.1	PFAM:PF00011
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PFscan:PS01031	PANTHER:PTHR34661	PANTHER:PTHR34661:SF3	UniProt:Q84K79	SUPFAM:SSF49764	UniParc:UPI000000BE65

Description

ACD22.3Alpha-crystallin domain-containing protein 22.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84K79]

Coordinates

chr1:+:20454389..20456220

Molecular Weight (calculated)

22299.4 Da

IEP (calculated)

4.616

GRAVY (calculated)

-0.320

Length

206 amino acids

Sequence
(BLAST)

001: MRSSSGLNGM RENNSFPDNT RNPQILEVTP LNSMPYIGPV THASMSSNRM NDSVEKVGGP AMIFLPSDSS SEFSNLISQT KTGVALTGSA AMGKIGLTIG
101: LVDIAESEDS YYFRVALPGV SRDEKEFSCE IEPDGKIMIK GATTTGEQTV CKHNQIFKML TQNLCPPGHF TINFQLPGPV SNEEFNGNFG SDGVLEGVVK
201: KVYYED

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.