CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021325.1-P	Field mustard	cytosol	78.28	99.48
CDY17558	Canola	cytosol	77.46	98.44
AT1G54850.1	Thale cress	cytosol	61.48	72.82
VIT_14s0128g00260.t01	Wine grape	cytosol	39.34	57.48
CDX87597	Canola	plastid	22.95	40.58
PGSC0003DMT400073582	Potato	cytosol	38.11	40.26
Solyc01g098810.2.1	Tomato	cytosol, nucleus	37.3	39.57
CDX88280	Canola	plastid	22.13	39.13
CDX85951	Canola	extracellular	22.13	38.03
CDX68096	Canola	extracellular	21.72	37.32
VIT_14s0128g00270.t01	Wine grape	cytosol	35.66	34.66
CDY29497	Canola	nucleus	25.41	24.31
CDY43484	Canola	cytosol	29.1	21.65
CDY17557	Canola	cytosol	27.87	20.24
CDY31505	Canola	cytosol	24.18	19.73
CDY31860	Canola	nucleus	27.46	14.66
CDY01350	Canola	nucleus	27.05	14.35

Protein Annotations

EnsemblPlants:CDY43486	EnsemblPlantsGene:GSBRNA2T00076757001	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20-like_chaperone	InterPro:IPR002068
InterPro:IPR008978	PANTHER:PTHR34661	PANTHER:PTHR34661:SF3	PFAM:PF00011	PFscan:PS01031	ProteinID:CDY43486
ProteinID:CDY43486.1	SEG:seg	SUPFAM:SSF49764	UniParc:UPI0004EF1D45	UniProt:A0A078I0Z5	MapMan:35.1

Description

BnaA01g21410DBnaA01g21410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0Z5]

Coordinates

chrLK032559:+:105334..108630

Molecular Weight (calculated)

26658.0 Da

IEP (calculated)

9.333

GRAVY (calculated)

-0.372

Length

244 amino acids

Sequence
(BLAST)

001: MFLIRLFLIS TEAVERKKKK ENKTQEAPRR VLRRLLKKKR LRLRSSSSGQ NGMRESTGFP QVIEVAPLNS LPYVGPLNGN SSMSGNKANE TAEKTGPPAM
101: IFLPSESAPE FYSLISQSKT GVALTGSAAM GKIGPTIGLV DIAESDDSYY FRVSLPGVSR DEKEFSCEIE PDGKILIKGA TTTGEKTVCK HNQVFKMLSQ
201: NLCPPGHFTI SFQLPGPVSN EDFSGNFGAD GVLEGVVKKL YYED

Best Arabidopsis Sequence Match ( AT1G54850.1 )
(BLAST)

001: MRSSSGLNGM RENNSFPDNT RNPQILEVTP LNSMPYIGPV THASMSSNRM NDSVEKVGGP AMIFLPSDSS SEFSNLISQT KTGVALTGSA AMGKIGLTIG
101: LVDIAESEDS YYFRVALPGV SRDEKEFSCE IEPDGKIMIK GATTTGEQTV CKHNQIFKML TQNLCPPGHF TINFQLPGPV SNEEFNGNFG SDGVLEGVVK
201: KVYYED

Arabidopsis Description

ACD22.3Alpha-crystallin domain-containing protein 22.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84K79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.