Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- extracellular 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g082730.1.1 | Tomato | cytosol | 43.07 | 45.74 |
| Bra015744.1-P | Field mustard | plastid | 25.55 | 25.36 |
| CDX87597 | Canola | plastid | 25.55 | 25.36 |
| Bra003718.1-P | Field mustard | extracellular | 26.28 | 25.35 |
| CDX85951 | Canola | extracellular | 26.28 | 25.35 |
| CDX68096 | Canola | extracellular | 25.55 | 24.65 |
| CDX88280 | Canola | plastid | 24.82 | 24.64 |
| AT1G76440.1 | Thale cress | cytosol | 24.09 | 23.08 |
| PGSC0003DMT400025889 | Potato | cytosol | 25.55 | 22.88 |
| VIT_18s0122g00770.t01 | Wine grape | extracellular | 22.63 | 19.02 |
| PGSC0003DMT400025891 | Potato | cytosol | 27.01 | 18.78 |
| PGSC0003DMT400073582 | Potato | cytosol | 31.39 | 18.61 |
| PGSC0003DMT400073580 | Potato | cytosol, nucleus, plasma membrane | 27.74 | 7.77 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400025890 | EnsemblPlantsGene:PGSC0003DMG401009997 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20-like_chaperone | InterPro:IPR002068 |
| InterPro:IPR008978 | PANTHER:PTHR34661 | PFAM:PF00011 | PGSC:PGSC0003DMG401009997 | UniParc:UPI000294A4ED | UniProt:M1AMA2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Heat shock protein [Source:PGSC_GENE;Acc:PGSC0003DMG401009997]
Coordinates
chr4:-:71894451..71897173
Molecular Weight (calculated)
14825.9 Da
IEP (calculated)
11.664
GRAVY (calculated)
0.022
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIAYPFTFN AHVIRTGAAR EGREGDSNDT VTITITAISY KFEVVLPAVA RSLGNLSVVV LPNGNVKVEG IVRAGERTSS TAPTVFNRRT RRIFPLGHFT
101: INFTLPGPAD PTIVRAKLDS NGVLKGTAFK RWIGRSG
101: INFTLPGPAD PTIVRAKLDS NGVLKGTAFK RWIGRSG
001: MRSSSGLNGM RENNSFPDNT RNPQILEVTP LNSMPYIGPV THASMSSNRM NDSVEKVGGP AMIFLPSDSS SEFSNLISQT KTGVALTGSA AMGKIGLTIG
101: LVDIAESEDS YYFRVALPGV SRDEKEFSCE IEPDGKIMIK GATTTGEQTV CKHNQIFKML TQNLCPPGHF TINFQLPGPV SNEEFNGNFG SDGVLEGVVK
201: KVYYED
101: LVDIAESEDS YYFRVALPGV SRDEKEFSCE IEPDGKIMIK GATTTGEQTV CKHNQIFKML TQNLCPPGHF TINFQLPGPV SNEEFNGNFG SDGVLEGVVK
201: KVYYED
Arabidopsis Description
ACD22.3Alpha-crystallin domain-containing protein 22.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84K79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.