Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- golgi 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025890 | Potato | cytosol | 45.74 | 43.07 |
| Solyc04g082720.2.1 | Tomato | cytosol, nucleus | 18.6 | 15.69 |
| CDX88280 | Canola | plastid | 13.95 | 13.04 |
| Bra003718.1-P | Field mustard | extracellular | 13.95 | 12.68 |
| CDX68096 | Canola | extracellular | 13.95 | 12.68 |
| CDX85951 | Canola | extracellular | 13.95 | 12.68 |
| Bra015744.1-P | Field mustard | plastid | 13.18 | 12.32 |
| CDX87597 | Canola | plastid | 13.18 | 12.32 |
| AT1G76440.1 | Thale cress | cytosol | 12.4 | 11.19 |
| VIT_18s0122g00770.t01 | Wine grape | extracellular | 13.95 | 11.04 |
| Solyc04g082740.2.1 | Tomato | cytosol | 13.18 | 8.63 |
| Solyc01g098810.2.1 | Tomato | cytosol, nucleus | 13.95 | 7.83 |
| Solyc01g098790.1.1 | Tomato | cytosol, nucleus, plasma membrane | 16.28 | 4.31 |
Protein Annotations
| EnsemblPlants:Solyc04g082730.1.1 | EnsemblPlantsGene:Solyc04g082730.1 | UniParc:UPI000276687B | UniProt:K4BW00 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4:-:66304052..66304720
Molecular Weight (calculated)
14287.2 Da
IEP (calculated)
10.017
GRAVY (calculated)
-0.078
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSCIGGNLS VDVLPNGNVN LEGIVRASIT APTISNRRTR RIFPLGRHFT INFTLPGTAD PTIVRAKLDS KGTAFKRWIV LLIYLARFSH IGNQAGELME
101: ATLFSPARCK GEFYMHHYSS FEADSSVKN
101: ATLFSPARCK GEFYMHHYSS FEADSSVKN
001: MHSSLIKLGF LLLLLQVSLS HAQLSPSFYD KTCPQVFDIV TNTIVNALRS DPRIAASILR LHFHDCFVNG CDASILLDNT TSFRTEKDAF GNANSARGFD
101: VIDKMKAAIE KACPRTVSCA DMLAIAAKES IVLAGGPSWM VPNGRRDSLR GFMDLANDNL PGPSSTLKQL KDRFKNVGLD RSSDLVALSG GHTFGKSQCQ
201: FIMDRLYNFG ETGLPDPTLD KSYLATLRKQ CPRNGNQSVL VDFDLRTPTL FDNKYYVNLK ENKGLIQSDQ ELFSSPDAAD TLPLVRAYAD GQGTFFDAFV
301: KAIIRMSSLS PLTGKQGEIR LNCRVVNSKS KIMDVVDDAL EFASFM
101: VIDKMKAAIE KACPRTVSCA DMLAIAAKES IVLAGGPSWM VPNGRRDSLR GFMDLANDNL PGPSSTLKQL KDRFKNVGLD RSSDLVALSG GHTFGKSQCQ
201: FIMDRLYNFG ETGLPDPTLD KSYLATLRKQ CPRNGNQSVL VDFDLRTPTL FDNKYYVNLK ENKGLIQSDQ ELFSSPDAAD TLPLVRAYAD GQGTFFDAFV
301: KAIIRMSSLS PLTGKQGEIR LNCRVVNSKS KIMDVVDDAL EFASFM
Arabidopsis Description
PER38Peroxidase 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDA4]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.