CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44015	Soybean	nucleus	85.28	85.28
PGSC0003DMT400025891	Potato	cytosol	24.11	48.22
Solyc04g082740.2.1	Tomato	cytosol	23.35	46.7
VIT_18s0122g00750.t01	Wine grape	nucleus	45.43	45.32
AT1G20870.1	Thale cress	cytosol	39.85	33.91
CDY31860	Canola	nucleus	37.82	32.6
CDY29497	Canola	nucleus	21.07	32.55
Bra025851.1-P	Field mustard	nucleus	20.81	32.16
CDY01350	Canola	nucleus	36.04	30.87
Bra012253.1-P	Field mustard	nucleus	35.79	30.65
KRH33964	Soybean	cytosol	30.96	30.5
KRG92829	Soybean	nucleus	31.22	26.28
CDY31505	Canola	cytosol	18.27	24.08

Protein Annotations

EMBL:ACUP02009142	EnsemblPlants:KRH10443	EnsemblPlantsGene:GLYMA_15G047500	EntrezGene:100786407	Gene3D:2.60.40.790	InterPro:HSP20-like_chaperone
InterPro:IPR008978	PANTHER:PTHR34661	PANTHER:PTHR34661:SF1	ProteinID:KRH10443	ProteinID:KRH10443.1	UniParc:UPI000233BBBD
UniProt:A0A0R0G5Q4	MapMan:12.5.3.2.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:3759385..3761756

Molecular Weight (calculated)

44294.5 Da

IEP (calculated)

9.004

GRAVY (calculated)

-0.293

Length

394 amino acids

Sequence
(BLAST)

001: MDFRGNLNCK RRALTVKPVS SDSDRKFLID FIVTTYLGPD VKSHNPRCSV IQRLIAGSPL YILSDLGPSY VSVSFLERLY YYLLRDASPD LVLDINMFHM
101: YLKGKLVLPT SDFTRDSQQF TSFFPLDLHQ QIRYPDSFRV VKGAVLIDDP STSCIKEKDL NRFRSLTGVR TFKLNISECQ CFQLDRRSSK EADGSCMNKM
201: PETFPNGGCQ SEKFQQERKR KYTDDTSLML EFPDVLPTEH NAKVEPSRKK CKSDGPTFMP LLPIPDVDDC NRDSSLILTG AARRGPFGPS VGVVDIGISK
301: VAYLFRISLP GVKKDCTGQF SCDIESDGRV QIRGVLTGGS TITKQSRVFK MKIRQLCSPG PFTLSFSLPG PVDPRLFAPN FRPDGIFEGV IIKQ

Best Arabidopsis Sequence Match ( AT1G20870.1 )
(BLAST)

001: MSLYSDGLSS DQYFLVNFIM SNYLGPDVYS DNPRCSSSQR LARGLPPYTL MHIGSSSLTV SQLQNLYYNV LRNAKSSLLL HPDMIYMYLK GYLPLEPSGK
101: FPQFTHFFPT NLHPQKRYSP SHEIVKGIVV IDDPAVGFIN KEELQRFRCL SRLDDLKIDR VTSLSPRVNL DESRETEQDC SRNGDATANG VVTNEDYNSS
201: GELQETCKRK EGEDAVASCV ISEPERLSGD IPESQGMKQD CSRNGESAFS GIVSDQDYYS FVKLPETCKR KNKEEEAVTG HAVSGTSKTP ERFRETYKRR
301: RFKNSSKKAT NKNGETLMER EKTDKPIPFS SEMKESDAEP SVVTTGTASK ETLGSSVGVV DIGVNKVAYF FQVALPGVRK DYGEFSCEIE SDGKVILEGS
401: TTRGEKNIKR HSRVFEMNIR KLCPPGPFKL CFNLPGPVDP RLFSPNFRSD GIFEGVIIRH KNS

Arabidopsis Description

IDM3Increased DNA methylation 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.