Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60284 | Soybean | nucleus, plastid | 71.62 | 71.62 |
| KRH48392 | Soybean | mitochondrion | 46.85 | 43.51 |
| KRH39286 | Soybean | plastid | 47.3 | 43.21 |
| PGSC0003DMT400056815 | Potato | mitochondrion | 27.48 | 41.22 |
| KRH23447 | Soybean | mitochondrion | 33.33 | 34.26 |
| KRH44358 | Soybean | mitochondrion | 25.23 | 33.53 |
| KRH09868 | Soybean | mitochondrion | 32.43 | 33.18 |
| KRH47035 | Soybean | mitochondrion | 27.03 | 28.04 |
Protein Annotations
| EMBL:ACUP02004772 | EnsemblPlants:KRH41575 | EnsemblPlantsGene:GLYMA_08G038500 | EntrezGene:100811016 | PANTHER:PTHR35461 | PANTHER:PTHR35461:SF2 |
| ProteinID:KRH41575 | ProteinID:KRH41575.1 | UniParc:UPI0002338882 | UniProt:I1KQ19 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr8:+:3017784..3019057
Molecular Weight (calculated)
25859.7 Da
IEP (calculated)
8.893
GRAVY (calculated)
-0.855
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGSSISNT TKKFFQRTLE NYKSCFSPGY QKLPKTPQHN QFSSSVAAPC VLDDMDINNN PSYKELEKFY SDFTGQWDSV KEKGRPRRSK NKGQEVRNES
101: FVSLNNARSH DQIEKSEECD KNKNNIGLTH HSEKQKLNYM KDRKGNGNRM VEKKLRELEM LDMSDVDYVL DIEEVLHYYS RLTCPVYLQI VDKFFMEMCS
201: EFFGAPLRPV VTPRTPSIKV RS
101: FVSLNNARSH DQIEKSEECD KNKNNIGLTH HSEKQKLNYM KDRKGNGNRM VEKKLRELEM LDMSDVDYVL DIEEVLHYYS RLTCPVYLQI VDKFFMEMCS
201: EFFGAPLRPV VTPRTPSIKV RS
001: MVLRSSISNT RKLFQKTIDN FKSFFFNNGT YHKLPKTPNN TSTNINNDHP NSNIITSSSS SIHKQFQPKP KDYVTTNKAS SLQPRIGDRD ETLFSQPKVN
101: LVRTKLKEME KMMNDDIISD EYYVSDVIEF LHCYSRLRYT AYLDVVENFF MEVYSDFFSP HHLVGTRTAV QRRYPAVVGI GSYGGHKH
101: LVRTKLKEME KMMNDDIISD EYYVSDVIEF LHCYSRLRYT AYLDVVENFF MEVYSDFFSP HHLVGTRTAV QRRYPAVVGI GSYGGHKH
Arabidopsis Description
unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT3G24535]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.