Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41575 | Soybean | nucleus | 71.62 | 71.62 |
| KRH48392 | Soybean | mitochondrion | 48.2 | 44.77 |
| PGSC0003DMT400056815 | Potato | mitochondrion | 28.38 | 42.57 |
| KRH39286 | Soybean | plastid | 45.95 | 41.98 |
| KRH44358 | Soybean | mitochondrion | 25.23 | 33.53 |
| KRH09868 | Soybean | mitochondrion | 32.43 | 33.18 |
| KRH23447 | Soybean | mitochondrion | 31.53 | 32.41 |
| KRH47035 | Soybean | mitochondrion | 27.48 | 28.5 |
Protein Annotations
| EMBL:ACUP02003357 | EnsemblPlants:KRH60284 | EnsemblPlantsGene:GLYMA_05G231000 | EntrezGene:100784232 | PANTHER:PTHR35461 | PANTHER:PTHR35461:SF2 |
| ProteinID:KRH60284 | ProteinID:KRH60284.1 | SEG:seg | UniParc:UPI00023393D3 | UniProt:K7KRN1 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr5:+:40872964..40874120
Molecular Weight (calculated)
25923.8 Da
IEP (calculated)
8.946
GRAVY (calculated)
-0.946
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGSSISNT TKKFFQRALE NFKSCFSPGY QKLPKTPPHN QFSCSLDINN NPCYEELEKF YSDFTKQWDS EKEKQGRRRS KKKGQEVLNN ESFVSLNNAS
101: HDQIEKSEEC DKNKNKNKMG LTHHREKQKL EKQKLDHTKG RKGNGNCMTE KKLKELEMLD MSDVDYALDI EEVLHYYSRL TCPVYLEIVD KFFMEIYSEF
201: FGAPLGVRPV VTPRTPSIKV RS
101: HDQIEKSEEC DKNKNKNKMG LTHHREKQKL EKQKLDHTKG RKGNGNCMTE KKLKELEMLD MSDVDYALDI EEVLHYYSRL TCPVYLEIVD KFFMEIYSEF
201: FGAPLGVRPV VTPRTPSIKV RS
001: MFQKTNSFFH RTLHSLKSII IRAGKKLPRP KTHFSCTFCR SNSLDGDNIY ASFLNIWESD LENSIEGPLK LEHKVQEQEQ YHQVKKTEAC SSYSSRDCDT
101: MEKKINEMYM TETVDIEQAL DVEEALHYYS RISSPVYLNI VDKFFTDLYS
101: MEKKINEMYM TETVDIEQAL DVEEALHYYS RISSPVYLNI VDKFFTDLYS
Arabidopsis Description
LOW protein: ATP-dependent RNA helicase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LW80]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.