Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0517900-01 | Rice | mitochondrion | 71.6 | 42.34 |
| EER96988 | Sorghum | mitochondrion | 64.2 | 37.68 |
| AT4G34620.1 | Thale cress | mitochondrion | 29.63 | 21.24 |
| CDX69073 | Canola | mitochondrion | 29.63 | 21.24 |
| Bra011546.1-P | Field mustard | mitochondrion | 28.4 | 20.35 |
| CDX75448 | Canola | mitochondrion | 28.4 | 20.35 |
| KRG92023 | Soybean | mitochondrion | 25.93 | 17.07 |
| KRH34762 | Soybean | mitochondrion | 28.4 | 10.0 |
Protein Annotations
| Gene3D:3.30.1320.10 | MapMan:35.1 | UniProt:A0A1B6PIT0 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR023803 |
| EnsemblPlants:KXG25589 | ProteinID:KXG25589 | ProteinID:KXG25589.1 | PANTHER:PTHR12919 | PANTHER:PTHR12919:SF28 | InterPro:Ribosomal_S16 |
| InterPro:Ribosomal_S16_dom_sf | EnsemblPlantsGene:SORBI_3007G201300 | SUPFAM:SSF54565 | UniParc:UPI00081ABA6E | : | : |
Description
hypothetical protein
Coordinates
chr7:-:63224993..63225777
Molecular Weight (calculated)
8593.3 Da
IEP (calculated)
4.266
GRAVY (calculated)
-0.172
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MSTTYWLSIG AQPSDPVECI LFRAGILPPP PVLVMAPKGG PRDRHPIDPL TGRPLDIEGL TIVDDPSTPH SENGAPIEEA A
001: MVVRIRLSRF GCKNRPFFRV MAADSRSPRD GKHLEVLGYF NPLPGQDGGK RMGLKFDRIK YWLSVGAQPS DPVQRLLFRS GLLPPPPMVA MGRKGGARDT
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
Arabidopsis Description
RPS16-230S ribosomal protein S16-2, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LTS6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.