Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69073 | Canola | mitochondrion | 99.11 | 99.11 |
| CDX75448 | Canola | mitochondrion | 99.11 | 99.11 |
| AT4G34620.1 | Thale cress | mitochondrion | 91.15 | 91.15 |
| HORVU5Hr1G074860.2 | Barley | mitochondrion | 29.2 | 51.56 |
| KRG92023 | Soybean | mitochondrion | 54.87 | 50.41 |
| Os09t0498100-01 | Rice | mitochondrion | 57.52 | 47.79 |
| Bra002779.1-P | Field mustard | mitochondrion | 54.87 | 47.33 |
| EER96988 | Sorghum | mitochondrion | 57.52 | 47.1 |
| TraesCS1D01G369100.1 | Wheat | mitochondrion | 56.64 | 47.06 |
| Os08t0517900-01 | Rice | mitochondrion | 56.64 | 46.72 |
| Zm00001d020983_P001 | Maize | mitochondrion | 56.64 | 46.38 |
| HORVU5Hr1G074920.10 | Barley | mitochondrion | 56.64 | 46.04 |
| TraesCS1A01G363900.1 | Wheat | mitochondrion | 56.64 | 46.04 |
| TraesCS5A01G276000.1 | Wheat | mitochondrion | 56.64 | 46.04 |
| TraesCS5B01G275300.1 | Wheat | mitochondrion | 56.64 | 46.04 |
| TraesCS5D01G283300.1 | Wheat | mitochondrion | 56.64 | 46.04 |
| Bra035637.1-P | Field mustard | mitochondrion | 54.87 | 45.59 |
| HORVU5Hr1G074850.1 | Barley | cytosol | 21.24 | 32.88 |
| KXG25589 | Sorghum | cytosol | 20.35 | 28.4 |
| KRH34762 | Soybean | mitochondrion | 56.64 | 27.83 |
| HORVU4Hr1G046370.3 | Barley | cytosol, mitochondrion, plastid | 27.43 | 23.66 |
| Bra006841.1-P | Field mustard | mitochondrion | 19.47 | 16.79 |
Protein Annotations
| MapMan:17.7.1.2.14 | Gene3D:3.30.1320.10 | EnsemblPlantsGene:Bra011546 | EnsemblPlants:Bra011546.1 | EnsemblPlants:Bra011546.1-P | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009790 |
| GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019904 |
| InterPro:IPR023803 | UniProt:M4D4Y9 | HAMAP:MF_00385 | PFAM:PF00886 | PANTHER:PTHR12919 | PANTHER:PTHR12919:SF28 |
| InterPro:Ribosomal_S16 | InterPro:Ribosomal_S16_dom_sf | SUPFAM:SSF54565 | TIGRFAMs:TIGR00002 | UniParc:UPI00025456F9 | : |
Description
AT4G34620 (E=4e-056) SSR16 | SSR16 (SMALL SUBUNIT RIBOSOMAL PROTEIN 16); structural constituent of ribosome
Coordinates
chrA01:+:1730571..1731552
Molecular Weight (calculated)
12777.5 Da
IEP (calculated)
10.620
GRAVY (calculated)
-0.516
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVKIRLARF GCKHRPFYRV VAADDKSRRD GKQIEVLGFY DPLQGKEDAN RVSLKFDRIK YWLSVGAQPT DSVENMLFRA GLIPPKSMVV RGSKNGQQST
101: NQHVSPITGE ILN
101: NQHVSPITGE ILN
001: MTVKIRLARL GCKHRPFYRV VVADEKSRRD GKQIEVLGFY DPLQGKEDAD RVSLKFDRIK YWLSVGAQPT DTVESMLFRA GLIPPKPMVV VGSKNGQKST
101: SQHVSPITGE ILN
101: SQHVSPITGE ILN
Arabidopsis Description
RPS16-1SSR16 [Source:UniProtKB/TrEMBL;Acc:A0A178UZA3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.