Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
18453549
plastid: 18453549 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96988 | Sorghum | mitochondrion | 94.85 | 93.48 |
| TraesCS1D01G369100.1 | Wheat | mitochondrion | 90.44 | 90.44 |
| Zm00001d020983_P001 | Maize | mitochondrion | 90.44 | 89.13 |
| TraesCS5D01G283300.1 | Wheat | mitochondrion | 88.97 | 87.05 |
| TraesCS5B01G275300.1 | Wheat | mitochondrion | 88.97 | 87.05 |
| TraesCS5A01G276000.1 | Wheat | mitochondrion | 88.97 | 87.05 |
| TraesCS1A01G363900.1 | Wheat | mitochondrion | 88.97 | 87.05 |
| Os08t0517900-01 | Rice | mitochondrion | 87.5 | 86.86 |
| HORVU5Hr1G074920.10 | Barley | mitochondrion | 88.24 | 86.33 |
| HORVU5Hr1G074850.1 | Barley | cytosol | 44.12 | 82.19 |
| HORVU5Hr1G074860.2 | Barley | mitochondrion | 36.03 | 76.56 |
| Bra011546.1-P | Field mustard | mitochondrion | 47.79 | 57.52 |
| CDX75448 | Canola | mitochondrion | 47.79 | 57.52 |
| CDX69073 | Canola | mitochondrion | 47.79 | 57.52 |
| AT4G34620.1 | Thale cress | mitochondrion | 47.06 | 56.64 |
| KRG92023 | Soybean | mitochondrion | 47.79 | 52.85 |
| HORVU4Hr1G046370.3 | Barley | cytosol, mitochondrion, plastid | 33.09 | 34.35 |
| KRH34762 | Soybean | mitochondrion | 47.06 | 27.83 |
Protein Annotations
| MapMan:17.7.1.2.14 | Gene3D:3.30.1320.10 | EntrezGene:4347467 | ProteinID:BAF25478.1 | ProteinID:BAT08790.1 | ProteinID:EEE69984.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015935 | GO:GO:0019538 | GO:GO:0032543 | InterPro:IPR023803 |
| HAMAP:MF_00385 | EnsemblPlantsGene:Os09g0498100 | EnsemblPlants:Os09t0498100-01 | PFAM:PF00886 | PANTHER:PTHR12919 | PANTHER:PTHR12919:SF28 |
| UniProt:Q0J0I9 | InterPro:Ribosomal_S16 | InterPro:Ribosomal_S16_dom_sf | SUPFAM:SSF54565 | TIGRFAMs:TIGR00002 | UniParc:UPI0000DD97C7 |
| RefSeq:XP_015611901.1 | SEG:seg | : | : | : | : |
Description
Similar to 30S ribosomal protein S16. (Os09t0498100-01)
Coordinates
chr9:+:19265965..19267538
Molecular Weight (calculated)
15163.5 Da
IEP (calculated)
10.498
GRAVY (calculated)
-0.549
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVRIRLARF GCRNRPFYRV MAADSRSPRD GKHLEVLGYY NPLPGKDGGK RMGLKFDRVK YWLSVGAQPS DPVQRILFRA GLLPPPPMLA MARKGGPRDR
101: RPIHPMTGRP LDLEGVTVVD DSNVPEGGAE EPVSEE
101: RPIHPMTGRP LDLEGVTVVD DSNVPEGGAE EPVSEE
001: MVVRIRLSRF GCKNRPFFRV MAADSRSPRD GKHLEVLGYF NPLPGQDGGK RMGLKFDRIK YWLSVGAQPS DPVQRLLFRS GLLPPPPMVA MGRKGGARDT
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
Arabidopsis Description
RPS16-230S ribosomal protein S16-2, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LTS6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.