Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G074860.2 | Barley | mitochondrion | 35.88 | 73.44 |
| Os09t0498100-01 | Rice | mitochondrion | 34.35 | 33.09 |
| HORVU5Hr1G074920.10 | Barley | mitochondrion | 34.35 | 32.37 |
| TraesCS5A01G276000.1 | Wheat | mitochondrion | 34.35 | 32.37 |
| TraesCS5B01G275300.1 | Wheat | mitochondrion | 34.35 | 32.37 |
| TraesCS5D01G283300.1 | Wheat | mitochondrion | 34.35 | 32.37 |
| EER96988 | Sorghum | mitochondrion | 33.59 | 31.88 |
| Zm00001d020983_P001 | Maize | mitochondrion | 33.59 | 31.88 |
| Bra011546.1-P | Field mustard | mitochondrion | 23.66 | 27.43 |
| CDX69073 | Canola | mitochondrion | 23.66 | 27.43 |
| CDX75448 | Canola | mitochondrion | 23.66 | 27.43 |
| KRG92023 | Soybean | mitochondrion | 24.43 | 26.02 |
| AT4G34620.1 | Thale cress | mitochondrion | 22.14 | 25.66 |
| KRH34762 | Soybean | mitochondrion | 24.43 | 13.91 |
| HORVU5Hr1G074850.1 | Barley | cytosol | 2.29 | 4.11 |
Protein Annotations
| Gene3D:3.30.1320.10 | MapMan:35.1 | UniProt:A0A287NY41 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:HORVU4Hr1G046370 |
| EnsemblPlants:HORVU4Hr1G046370.3 | InterPro:IPR023803 | PFAM:PF00886 | PANTHER:PTHR12919 | PANTHER:PTHR12919:SF28 | InterPro:Ribosomal_S16 |
| InterPro:Ribosomal_S16_dom_sf | SUPFAM:SSF54565 | TIGRFAMs:TIGR00002 | UniParc:UPI000B46A0D8 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr4H:-:368908399..368911472
Molecular Weight (calculated)
14859.8 Da
IEP (calculated)
9.287
GRAVY (calculated)
-0.456
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: HVSIQRWSLS SETLTTHHSA LLQILSRLPR LPPTIPTAAD LVSHPRFQHP HPSPGEAKAG GEEEGEESIT MVVRIRLTRF GCRNRPFYRV MAADSRWLRD
101: GKHLEVLGYY NPLPGETAHH HPQSICTRIF V
101: GKHLEVLGYY NPLPGETAHH HPQSICTRIF V
001: MVVRIRLSRF GCKNRPFFRV MAADSRSPRD GKHLEVLGYF NPLPGQDGGK RMGLKFDRIK YWLSVGAQPS DPVQRLLFRS GLLPPPPMVA MGRKGGARDT
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
Arabidopsis Description
RPS16-230S ribosomal protein S16-2, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LTS6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.