Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0498100-01 | Rice | mitochondrion | 76.56 | 36.03 |
| HORVU4Hr1G046370.3 | Barley | cytosol, mitochondrion, plastid | 73.44 | 35.88 |
| EER96988 | Sorghum | mitochondrion | 76.56 | 35.51 |
| Zm00001d020983_P001 | Maize | mitochondrion | 76.56 | 35.51 |
| HORVU5Hr1G074920.10 | Barley | mitochondrion | 75.0 | 34.53 |
| TraesCS5A01G276000.1 | Wheat | mitochondrion | 75.0 | 34.53 |
| TraesCS5B01G275300.1 | Wheat | mitochondrion | 75.0 | 34.53 |
| TraesCS5D01G283300.1 | Wheat | mitochondrion | 75.0 | 34.53 |
| Bra011546.1-P | Field mustard | mitochondrion | 51.56 | 29.2 |
| CDX69073 | Canola | mitochondrion | 51.56 | 29.2 |
| CDX75448 | Canola | mitochondrion | 51.56 | 29.2 |
| KRG92023 | Soybean | mitochondrion | 53.12 | 27.64 |
| AT4G34620.1 | Thale cress | mitochondrion | 48.44 | 27.43 |
| KRH34762 | Soybean | mitochondrion | 53.12 | 14.78 |
| HORVU5Hr1G074850.1 | Barley | cytosol | 4.69 | 4.11 |
Protein Annotations
| Gene3D:3.30.1320.10 | MapMan:35.1 | UniProt:A0A287RTV7 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:HORVU5Hr1G074860 |
| EnsemblPlants:HORVU5Hr1G074860.2 | InterPro:IPR023803 | PFAM:PF00886 | PANTHER:PTHR12919 | PANTHER:PTHR12919:SF28 | InterPro:Ribosomal_S16 |
| InterPro:Ribosomal_S16_dom_sf | SUPFAM:SSF54565 | TIGRFAMs:TIGR00002 | UniParc:UPI000B4666E4 | : | : |
Description
No Description!
Coordinates
chrchr5H:+:545111788..545111986
Molecular Weight (calculated)
7514.1 Da
IEP (calculated)
11.233
GRAVY (calculated)
-0.739
Length
64 amino acids
Sequence
(BLAST)
(BLAST)
1: MVVRIRLARF GCRNRPFYRV MAADSRSPRD GKHLEVLGYY NPLPGETARH RPPVDLYTYP RRPA
001: MTVKIRLARL GCKHRPFYRV VVADEKSRRD GKQIEVLGFY DPLQGKEDAD RVSLKFDRIK YWLSVGAQPT DTVESMLFRA GLIPPKPMVV VGSKNGQKST
101: SQHVSPITGE ILN
101: SQHVSPITGE ILN
Arabidopsis Description
RPS16-1SSR16 [Source:UniProtKB/TrEMBL;Acc:A0A178UZA3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.