Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32914 | Canola | mitochondrion, plastid | 36.64 | 57.14 |
| Bra002779.1-P | Field mustard | mitochondrion | 41.98 | 41.98 |
| AT5G56940.1 | Thale cress | mitochondrion | 42.75 | 41.48 |
| Bra035637.1-P | Field mustard | mitochondrion | 41.98 | 40.44 |
| PGSC0003DMT400059174 | Potato | cytosol | 29.01 | 33.93 |
| Solyc07g008660.2.1 | Tomato | plastid | 32.82 | 32.58 |
| VIT_11s0016g02040.t01 | Wine grape | mitochondrion | 32.06 | 30.88 |
| GSMUA_Achr10P... | Banana | mitochondrion | 31.3 | 30.6 |
| KRH12416 | Soybean | mitochondrion | 30.53 | 30.3 |
| KRH37413 | Soybean | mitochondrion | 30.53 | 30.3 |
| Bra011546.1-P | Field mustard | mitochondrion | 16.79 | 19.47 |
Protein Annotations
| MapMan:35.1 | EnsemblPlantsGene:Bra006841 | EnsemblPlants:Bra006841.1 | EnsemblPlants:Bra006841.1-P | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| UniProt:M4CRK0 | PANTHER:PTHR12919 | PANTHER:PTHR12919:SF28 | InterPro:Ribosomal_S16 | UniParc:UPI000253FD11 | : |
Description
AT5G56940 (E=2e-019) | ribosomal protein S16 family protein
Coordinates
chrA03:-:5296280..5298872
Molecular Weight (calculated)
14501.4 Da
IEP (calculated)
10.780
GRAVY (calculated)
-0.762
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVRRGLGLL QSFARNVQGR MVASDPVQRL LFRSGLLPPP PPMVAMGRKG GERDTRTVDP MTGRYVDAEN KPPILFASSS SNGGYGTYRW RKRHSCGRSD
101: PMTGRYVDAE NKPAVINNKP KEEVNAEDKS P
101: PMTGRYVDAE NKPAVINNKP KEEVNAEDKS P
001: MVVRIRLSRF GCKNRPFFRV MAADSRSPRD GKHLEVLGYF NPLPGQDGGK RMGLKFDRIK YWLSVGAQPS DPVQRLLFRS GLLPPPPMVA MGRKGGARDT
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
Arabidopsis Description
RPS16-230S ribosomal protein S16-2, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LTS6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.