Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20704 | Canola | mitochondrion | 100.0 | 100.0 |
| Bra002779.1-P | Field mustard | mitochondrion | 93.38 | 96.95 |
| AT5G56940.1 | Thale cress | mitochondrion | 87.5 | 88.15 |
| VIT_11s0016g02040.t01 | Wine grape | mitochondrion | 73.53 | 73.53 |
| KRH12416 | Soybean | mitochondrion | 71.32 | 73.48 |
| KRH37413 | Soybean | mitochondrion | 71.32 | 73.48 |
| Solyc07g008660.2.1 | Tomato | plastid | 71.32 | 73.48 |
| PGSC0003DMT400059174 | Potato | cytosol | 58.82 | 71.43 |
| GSMUA_Achr10P... | Banana | mitochondrion | 66.91 | 67.91 |
| Bra011546.1-P | Field mustard | mitochondrion | 45.59 | 54.87 |
| Bra006841.1-P | Field mustard | mitochondrion | 40.44 | 41.98 |
Protein Annotations
| MapMan:17.7.1.2.14 | Gene3D:3.30.1320.10 | EnsemblPlantsGene:Bra035637 | EnsemblPlants:Bra035637.1 | EnsemblPlants:Bra035637.1-P | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR023803 | UniProt:M4F3I7 | HAMAP:MF_00385 | PFAM:PF00886 | PANTHER:PTHR12919 |
| PANTHER:PTHR12919:SF28 | InterPro:Ribosomal_S16 | InterPro:Ribosomal_S16_dom_sf | SUPFAM:SSF54565 | TIGRFAMs:TIGR00002 | UniParc:UPI00025460C7 |
Description
AT5G56940 (E=3e-066) | ribosomal protein S16 family protein
Coordinates
chrA02:-:7067794..7069126
Molecular Weight (calculated)
15275.6 Da
IEP (calculated)
10.807
GRAVY (calculated)
-0.668
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVRLRLSRL GCKNRPFFRV MAADSRSPRD GKHIEVLGYF NPLPGQDGGK RMGLKFDRIK YWLSVGAQAS DPVQRLLFRS GLLPPPPMVA MGRKGGERDT
101: RPVDPMTGRF VDAEKKTPVI IDNQPKEEDN AQDKSP
101: RPVDPMTGRF VDAEKKTPVI IDNQPKEEDN AQDKSP
001: MVVRIRLSRF GCKNRPFFRV MAADSRSPRD GKHLEVLGYF NPLPGQDGGK RMGLKFDRIK YWLSVGAQPS DPVQRLLFRS GLLPPPPMVA MGRKGGARDT
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
Arabidopsis Description
RPS16-230S ribosomal protein S16-2, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LTS6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.