Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002779.1-P | Field mustard | mitochondrion | 88.15 | 90.84 |
| CDY50469 | Canola | mitochondrion | 88.15 | 90.84 |
| Bra035637.1-P | Field mustard | mitochondrion | 88.15 | 87.5 |
| CDY20704 | Canola | mitochondrion | 88.15 | 87.5 |
| CDY32915 | Canola | mitochondrion | 87.41 | 86.76 |
| CDY32914 | Canola | mitochondrion, plastid | 48.15 | 77.38 |
| CDY11894 | Canola | mitochondrion | 65.93 | 76.72 |
| KRH12416 | Soybean | mitochondrion | 73.33 | 75.0 |
| KRH37413 | Soybean | mitochondrion | 73.33 | 75.0 |
| VIT_11s0016g02040.t01 | Wine grape | mitochondrion | 74.81 | 74.26 |
| Solyc07g008660.2.1 | Tomato | plastid | 72.59 | 74.24 |
| GSMUA_Achr10P... | Banana | mitochondrion | 71.85 | 72.39 |
| PGSC0003DMT400059174 | Potato | cytosol | 60.0 | 72.32 |
| AT4G34620.1 | Thale cress | mitochondrion | 46.67 | 55.75 |
| Bra006841.1-P | Field mustard | mitochondrion | 41.48 | 42.75 |
Protein Annotations
| MapMan:17.7.1.2.14 | Gene3D:3.30.1320.10 | EntrezGene:835796 | UniProt:A0A178UPP3 | ProteinID:AED96825.1 | ArrayExpress:AT5G56940 |
| EnsemblPlantsGene:AT5G56940 | RefSeq:AT5G56940 | TAIR:AT5G56940 | RefSeq:AT5G56940-TAIR-G | EnsemblPlants:AT5G56940.1 | TAIR:AT5G56940.1 |
| EMBL:AY034927 | EMBL:AY059147 | EMBL:AY085989 | Unigene:At.7092 | ProteinID:BAA97024.1 | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0015935 | GO:GO:0019538 | GO:GO:0030529 |
| GO:GO:0032543 | InterPro:IPR023803 | HAMAP:MF_00385 | RefSeq:NP_200504.1 | ProteinID:OAO94952.1 | PFAM:PF00886 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR12919 | PANTHER:PTHR12919:SF28 | UniProt:Q9LTS6 | InterPro:Ribosomal_S16 | InterPro:Ribosomal_S16_dom_sf | SUPFAM:SSF54565 |
| TIGRFAMs:TIGR00002 | UniParc:UPI00000A49D8 | : | : | : | : |
Description
RPS16-230S ribosomal protein S16-2, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LTS6]
Coordinates
chr5:+:23030747..23032411
Molecular Weight (calculated)
15102.2 Da
IEP (calculated)
10.758
GRAVY (calculated)
-0.716
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVRIRLSRF GCKNRPFFRV MAADSRSPRD GKHLEVLGYF NPLPGQDGGK RMGLKFDRIK YWLSVGAQPS DPVQRLLFRS GLLPPPPMVA MGRKGGARDT
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
101: RPVDPMTGRY VDAENKTVNA NDNQPKEEDT EAKSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.