CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0513100-01	Rice	cytosol, nucleus	31.39	67.19
Bra015733.1-P	Field mustard	plastid	38.69	39.26
CDX87586	Canola	plastid	38.69	39.26
AT1G76560.1	Thale cress	plastid	37.96	38.81
CDX88298	Canola	plastid	37.96	38.81
PGSC0003DMT400025712	Potato	plastid	34.31	38.52
VIT_18s0122g00460.t01	Wine grape	plastid	37.23	38.06
Solyc04g082910.1.1	Tomato	plastid	21.9	34.48
EER94980	Sorghum	plastid	23.36	24.62
EER88061	Sorghum	plastid	18.98	20.16

Protein Annotations

MapMan:35.2	UniProt:A0A1B6PIV9	InterPro:DUF_CP12	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009987	GO:GO:0015979	GO:GO:0032991
GO:GO:0034605	GO:GO:0043234	GO:GO:0071454	GO:GO:0080153	EnsemblPlants:KXG25621	ProteinID:KXG25621
ProteinID:KXG25621.1	PFAM:PF02672	PANTHER:PTHR33921	PANTHER:PTHR33921:SF2	SMART:SM01093	EnsemblPlantsGene:SORBI_3007G207300
UniParc:UPI0003C66722	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:63683142..63683555

Molecular Weight (calculated)

15071.7 Da

IEP (calculated)

7.438

GRAVY (calculated)

-0.605

Length

137 amino acids

Sequence
(BLAST)

001: MASPSIGCPS SAPTALSAGA GARRPPSCVH LLCHRHQQHR SRRVVMAAAR RRYRGTVRRE AALAELVERK VAEAMEACGE RGQDRDDEGC RVAWDEVEEV
101: SQARADLRRR IAEAPGDPLE HFCAHNPTAD DCAVVYE

Best Arabidopsis Sequence Match ( AT1G76560.1 )
(BLAST)

001: MISGSATASH GRVLLPSQRE RRPVSTGSNI LRFRETVPRQ FSLMMVTKAT AKYMGTKMRE EKLSEMIEEK VKEATEVCEA EEMSEECRVA WDEVEEVSQA
101: RADLRIKLKL LNQDPLESFC QENPETDECR IYED

Arabidopsis Description

CP12-3CP12-3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.