Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015733.1-P | Field mustard | plastid | 98.52 | 98.52 |
| CDX88298 | Canola | plastid | 74.07 | 74.63 |
| AT1G76560.1 | Thale cress | plastid | 67.41 | 67.91 |
| PGSC0003DMT400025712 | Potato | plastid | 47.41 | 52.46 |
| VIT_18s0122g00460.t01 | Wine grape | plastid | 47.41 | 47.76 |
| Os08t0513100-01 | Rice | cytosol, nucleus | 22.22 | 46.88 |
| Solyc04g082910.1.1 | Tomato | plastid | 28.89 | 44.83 |
| KXG25621 | Sorghum | plastid | 39.26 | 38.69 |
| CDY51422 | Canola | plastid | 32.59 | 35.48 |
| CDY27491 | Canola | plastid | 31.85 | 34.4 |
| CDX83329 | Canola | plastid | 31.85 | 34.13 |
| CDX95723 | Canola | plastid | 31.85 | 34.13 |
| CDX80101 | Canola | plastid | 31.11 | 33.33 |
| CDY11420 | Canola | plastid | 31.85 | 33.08 |
| CDX67892 | Canola | plastid | 31.11 | 32.56 |
| CDY55379 | Canola | plastid | 30.37 | 32.54 |
| CDY25110 | Canola | plastid | 30.37 | 31.78 |
| CDX76635 | Canola | plastid | 29.63 | 31.01 |
Protein Annotations
| EnsemblPlants:CDX87586 | EnsemblPlantsGene:GSBRNA2T00146591001 | InterPro:DUF_CP12 | ncoils:Coil | PANTHER:PTHR33921 | PANTHER:PTHR33921:SF2 |
| PFAM:PF02672 | ProteinID:CDX87586 | ProteinID:CDX87586.1 | SMART:SM01093 | UniParc:UPI0004EF3958 | MapMan:35.1 |
Description
BnaA07g32870D
Coordinates
chrLK031850:-:1356541..1356948
Molecular Weight (calculated)
15318.2 Da
IEP (calculated)
4.936
GRAVY (calculated)
-0.712
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MSATASHGGV MMLPSPSGAL QHQRPPTVTG SDMFRVRRKE PRGLRLVVAA TAKYKGTKMR EEKLSEMIEE KVKEATEVCE ADVRSEECKV AWDEVEEVSQ
101: ARADLRIKLK FLNQDPLESF CQENPETDEC RIYED
101: ARADLRIKLK FLNQDPLESF CQENPETDEC RIYED
001: MISGSATASH GRVLLPSQRE RRPVSTGSNI LRFRETVPRQ FSLMMVTKAT AKYMGTKMRE EKLSEMIEEK VKEATEVCEA EEMSEECRVA WDEVEEVSQA
101: RADLRIKLKL LNQDPLESFC QENPETDECR IYED
101: RADLRIKLKL LNQDPLESFC QENPETDECR IYED
Arabidopsis Description
CP12-3CP12-3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.