Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG25621 | Sorghum | plastid | 67.19 | 31.39 |
| PGSC0003DMT400025712 | Potato | plastid | 50.0 | 26.23 |
| AT1G76560.1 | Thale cress | plastid | 50.0 | 23.88 |
| VIT_18s0122g00460.t01 | Wine grape | plastid | 48.44 | 23.13 |
| Os01t0303000-02 | Rice | extracellular, plasma membrane, plastid | 43.75 | 22.58 |
| CDX88298 | Canola | plastid | 46.88 | 22.39 |
| Bra015733.1-P | Field mustard | plastid | 46.88 | 22.22 |
| CDX87586 | Canola | plastid | 46.88 | 22.22 |
| Os03t0306800-01 | Rice | extracellular | 43.75 | 21.37 |
| Solyc04g082910.1.1 | Tomato | plastid | 20.31 | 14.94 |
Protein Annotations
| EnsemblPlants:Os08t0513100-01 | EnsemblPlantsGene:Os08g0513100 | InterPro:DUF_CP12 | PANTHER:PTHR33921 | PANTHER:PTHR33921:SF2 | PFAM:PF02672 |
| ProteinID:BAT06219.1 | SEG:seg | SMART:SM01093 | UniParc:UPI000393A8BA | UniProt:A0A0P0XHS0 | MapMan:35.2 |
Description
Similar to CP12-3. (Os08t0513100-01)
Coordinates
chr8:+:25441269..25441786
Molecular Weight (calculated)
6794.6 Da
IEP (calculated)
3.761
GRAVY (calculated)
-0.537
Length
64 amino acids
Sequence
(BLAST)
(BLAST)
1: ACAGEAAGEA GCRVAWDEVE EVSQAKAGLR RRIAQGADDP LEPFCSHNPL ADDCAVVYDD DDDE
001: MISGSATASH GRVLLPSQRE RRPVSTGSNI LRFRETVPRQ FSLMMVTKAT AKYMGTKMRE EKLSEMIEEK VKEATEVCEA EEMSEECRVA WDEVEEVSQA
101: RADLRIKLKL LNQDPLESFC QENPETDECR IYED
101: RADLRIKLKL LNQDPLESFC QENPETDECR IYED
Arabidopsis Description
CP12-3CP12-3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.