Factsheet for Bra015733.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87586	Canola	plastid	98.52	98.52
AT1G76560.1	Thale cress	plastid	68.89	69.4
PGSC0003DMT400025712	Potato	plastid	47.41	52.46
VIT_18s0122g00460.t01	Wine grape	plastid	47.41	47.76
Os08t0513100-01	Rice	cytosol, nucleus	22.22	46.88
Solyc04g082910.1.1	Tomato	plastid	28.89	44.83
KXG25621	Sorghum	plastid	39.26	38.69
Bra021396.1-P	Field mustard	plastid	31.85	34.68
Bra000451.1-P	Field mustard	plastid	31.11	33.33
Bra007678.1-P	Field mustard	plastid	31.85	33.08
Bra004459.1-P	Field mustard	plastid	30.37	32.28
Bra003499.1-P	Field mustard	plastid	30.37	31.78

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra015733	EnsemblPlants:Bra015733.1	EnsemblPlants:Bra015733.1-P	ncoils:Coil	InterPro:DUF_CP12
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009987	GO:GO:0015979	GO:GO:0032991	GO:GO:0034605	GO:GO:0043234	GO:GO:0071454
GO:GO:0080153	UniProt:M4DGV7	PFAM:PF02672	PANTHER:PTHR33921	PANTHER:PTHR33921:SF2	SMART:SM01093
UniParc:UPI00025420DD	:	:	:	:	:

Description

AT1G76560 (E=4e-050) CP12-3 | CP12-3

Coordinates

chrA07:+:21107650..21108057

Molecular Weight (calculated)

15443.4 Da

IEP (calculated)

5.120

GRAVY (calculated)

-0.767

Length

135 amino acids

Sequence
(BLAST)

001: MSATASHGGV MMLPSPSRPL QHQRPPTVTG SDMFRVRRKE PRGLRLVVAA TAKYKGTKMR EEKLSEMIEE KVKEATEVCE ADVRSEECKV AWDEVEEVSQ
101: ARADLRIKLK FLNQDPLESF CQENPETDEC RIYED

Best Arabidopsis Sequence Match ( AT1G76560.1 )
(BLAST)

001: MISGSATASH GRVLLPSQRE RRPVSTGSNI LRFRETVPRQ FSLMMVTKAT AKYMGTKMRE EKLSEMIEEK VKEATEVCEA EEMSEECRVA WDEVEEVSQA
101: RADLRIKLKL LNQDPLESFC QENPETDECR IYED

Arabidopsis Description

CP12-3CP12-3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.