CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g017900.1.1	Tomato	extracellular, golgi, plasma membrane	56.3	47.52
Solyc05g020010.1.1	Tomato	nucleus	14.29	10.83
HORVU0Hr1G034550.1	Barley	cytosol	0.0	0.0
Solyc02g020960.1.1	Tomato	plastid	0.0	0.0
Solyc09g059640.1.1	Tomato	cytosol	0.0	0.0
Solyc10g017890.1.1	Tomato	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.20.1130.10	MapMan:35.1	UniProt:A0A1Z5R744	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009522	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0016168	GO:GO:0016491
GO:GO:0018298	GO:GO:0019538	GO:GO:0046872	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
InterPro:IPR036408	EnsemblPlants:OQU79261	ProteinID:OQU79261	ProteinID:OQU79261.1	PFAM:PF00223	PRINTS:PR00257
InterPro:PSI_PsaA	InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_sf	PANTHER:PTHR30128	PANTHER:PTHR30128:SF8	EnsemblPlantsGene:SORBI_3008G120266
SUPFAM:SSF81558	TMHMM:TMhelix	UniParc:UPI000B8BAF98	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:53395312..53397046

Molecular Weight (calculated)

12654.4 Da

IEP (calculated)

7.618

GRAVY (calculated)

0.397

Length

119 amino acids

Sequence
(BLAST)

001: MADHRDGNPA LWPISISHPY WGGGELVAVG GKATLLPILL GTADFLVHHI HAFTIHVTVL ILLTGVLFAC SSRLIPDKAN LGFRFPCAGP GQGGTCQVSA
101: PDHVFLGLFQ GPGCSHKWY

Best Arabidopsis Sequence Match ( ATCG00350.1 )
(BLAST)

001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG

Arabidopsis Description

PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.